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ProteomicsGreenbug (Schizaphis graminum) Herbivory Effect on Switchgrass (Panicum virgatum) PhosphoProteomeGreenbug (Schizaphis graminum) Herbivory Effect on Switchgrass (Panicum virgatum) PhosphoProteome
Cereal aphids can successfully colonize and damage switchgrass (Panicum virgatum) plants. Among the aphids tested, greenbugs (Schizaphis graminum, GB) caused significant plant damage likely through a combination of aphid-salivary proteins that are injected into plants during feeding and a strong hos...
ORGANISM(S): Panicum virgatum (Switchgrass) 
2022-02-04 | PXD018546 | Pride
Greenbug Phosphoproteome Shotgun Switchgrass Label-free Lc-ms/ms 
ProteomicsGreenbug (Schizaphis graminum) Herbivory Effect on Switchgrass (Panicum virgatum) Proteome
Cereal aphids can successfully colonize and damage switchgrass (Panicum virgatum) plants. Among the aphids tested, greenbugs (Schizaphis graminum, GB) caused significant plant damage likely through a combination of aphid-salivary proteins that are injected into plants during feeding and a strong hos...
ORGANISM(S): Panicum virgatum (Switchgrass) 
2022-02-04 | PXD018547 | Pride
Greenbug Proteome Shotgun Switchgrass Label-free Lc-ms/ms 
TranscriptomicsHigh-throughput sequencing of small RNAs in Panicum virgatum
Small RNAs (21-24 nt) are pivotal regulators of gene expression that guide both transcriptional and post-transcriptional silencing mechanisms in diverse eukaryotes, including most if not all plants. MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are the two major types, both of which have a ...
ORGANISM(S): Panicum virgatum 
2011-05-09 | E-GEOD-28980 | biostudies-arrayexpress
GenomicsHigh-throughput sequencing of small RNAs in Panicum virgatum
Small RNAs (21-24 nt) are pivotal regulators of gene expression that guide both transcriptional and post-transcriptional silencing mechanisms in diverse eukaryotes, including most if not all plants. MicroRNAs (miRNAs) and short interfering RNAs (siRNAs) are the two major types, both of which have a ...
ORGANISM(S): Panicum virgatum 
2011-05-10 | GSE28980 | GEO
MetabolomicsTowards engineering ectomycorrhization into switchgrass bioenergy crops via a lectin receptor-like kinase
Soil-borne microbes can establish compatible relationships with host plants, providing a large variety of nutritive and protective compounds in exchange for photosynthesized sugars. However, the molecular mechanisms mediating the establishment of these beneficial relationships remain unclear. Our pr...
2021-08-11 | MTBLS2597 | MetaboLights
TranscriptomicsTranscriptional, Metabolic, Physiological and Developmental Responses to Nitrogen Limitation in Switchgrass (Panicum virgatum)
Sustainable production of switchgrass (Panicum virgatum) as a bioenergy crop hinges in part on efficient use of soil macronutrients, especially nitrogen (N). This study investigated the physiological, metabolic and transcriptomic responses of switchgrass to N limitation. Moderate N limitation marked...
ORGANISM(S): Panicum virgatum 
2023-12-31 | GSE237286 | GEO
TranscriptomicsTranscriptome profiling of switchgrass leaf grown under heat stress
In this study we were interested in identifying the gene networks that are responsive to chronic heat treatment in a switchgrass cultivar that is widely grown in the south-western USA and where 38C day temperatures have been reported for more than 100 days in the recent years. Switchgrass Alamo pla...
ORGANISM(S): Panicum virgaturm 
2014-01-14 | E-MTAB-1897 | biostudies-arrayexpress
TranscriptomicsProfiling changes in gene expression by RNA-Seq during drought and recovery in switchgrass (Panicum virgatum Alamo AP13)
In light of the changes in precipitation and soil water availability expected with climate change, understanding the mechanisms underlying plant responses to water deficit is essential. Toward that end we have conducted an integrative analysis of responses to drought stress in the perennial C4 grass...
ORGANISM(S): Panicum virgatum 
2014-07-01 | GSE57887 | GEO
TranscriptomicsProfiling changes in gene expression by RNA-Seq during drought and recovery in switchgrass (Panicum virgatum Alamo AP13)
In light of the changes in precipitation and soil water availability expected with climate change, understanding the mechanisms underlying plant responses to water deficit is essential. Toward that end we have conducted an integrative analysis of responses to drought stress in the perennial C4 grass...
ORGANISM(S): Panicum virgatum 
2014-07-01 | E-GEOD-57887 | biostudies-arrayexpress
UnknownFive nuclear loci resolve the polyploid history of switchgrass (Panicum virgatum L.) and relatives.
Not available
S-EPMC3377691 | biostudies-literature
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