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MetabolomicsEarly Soybean-Nematode Interactions: Transcriptomic Responses of Meloidogyne incognita at the Pre-Parasitic Stage and Metabolomic Profiling of Root Exudates

This dataset provides comprehensive metabolomic profiles from three experimental treatments involving Meloidogyne incognita and soybean root exudates. The data supports investigations into biochemical pathways and key metabolites associated with early plant-nematode interactions and serves as a r...

2025-05-12 | MTBLS11929 | MetaboLights
TranscriptomicsTranscription profiling of soybean cyst nematode (Heterodera glycines) throughout the nematode life cycle
Expression profiling of 7,530 Heterodera glycines probesets present on the Affymetrix Soybean Genome Array GeneChip throughout the life cycle of the nematode (egg, infective J2, parasitic J2, J3, J4, adult female).
ORGANISM(S): Heterodera glycines 
2007-10-20 | E-MEXP-1110 | biostudies-arrayexpress
TranscriptomicsTranscriptional reprogramming by root knot and migratory nematode infection in rice
In this study a comparison was made between the local transcriptional changes at two time points upon root knot (Meloidogyne graminicola) and migratory nematode (Hirschmanniella oryzae) infection in rice. Using mRNA-Seq we have characterized specific and general responses of the root challenged with...
ORGANISM(S): Oryza sativa Japonica Group 
2013-01-10 | E-GEOD-35843 | biostudies-arrayexpress
GenomicsParasitic Nematode Project
Studies to help develop parasitic nematode control programs
PRJNA72363 | ENA
TranscriptomicsNematode infection migratory stage
This experiment analyzes the changes in expression of twelve days old Arabidopsis roots at ten hours post inoculation upon cyst nematode H. schachtii infection.
ORGANISM(S): Arabidopsis thaliana 
2017-03-23 | E-MTAB-5610 | biostudies-arrayexpress
TranscriptomicsSystemic suppression of the rice shoot metabolism upon root rot nematode infection
Rice (Oryza sativa L.) is one of the most important staple foods in the world, feeding more than 50% of the human population. One of its most damaging pathogens, with major impact on rice yield, is the migratory root rot nematode Hirschmanniella oryzae. In comparison with the existing knowledge on t...
ORGANISM(S): Oryza sativa Japonica Group 
2015-05-18 | E-GEOD-57707 | biostudies-arrayexpress
TranscriptomicsGenome-wide expression analysis of the effects of a parasitic nematode's secreted exosomes on mammalian cells.
We show that a gastrointestinal nematode that infects mice, Heligmosomoides polygyrus, secretes vesicles packaged with specific microRNAs (miRNAs) and Y RNAs as well as a nematode-specific Argonaute protein. The vesicles are of intestinal origin and are enriched for homologs of mammalian proteins fo...
ORGANISM(S): Mus musculus 
2014-12-24 | E-GEOD-55941 | biostudies-arrayexpress
TranscriptomicsHigh-throughput sequencing of small RNAs from Brugia pahangi and Haemonchus contortus
Illumina sequencing of small RNAs from Brugia pahangi and Haemonchus contortus 4 samples examined, larval stage 3 and mixed sex adults from two parasitic nematode species.
ORGANISM(S): Brugia pahangi 
2011-12-20 | E-GEOD-34539 | biostudies-arrayexpress
GenomicsPlant Parasitic Nematodes
Plant parasitic nematode genome sequencing
PRJNA308318 | ENA
TranscriptomicsTranscription profiling of soybean roots at three time points after infection with soybean cyst nematodes
Parallel genome-wide expression profile of soybean and soybean cyst nematode at three points during infection 2, 5, 10 days post-inoculation.
ORGANISM(S): Glycine max 
2006-11-30 | E-MEXP-808 | biostudies-arrayexpress
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