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TranscriptomicsChIP-chip of E. coli K-12 MG1655 with antibody against PurR-8myc under various conditions.
We integrated transcription factor binding regions and mRNA transcript abundance to elucidate the PurR regulon experimentally. To measure transcription factor binding at a genome scale, we employed a ChIP-chip method to derivative strains of E. coli K-12 MG1655 harboring PurR-8myc under various con...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2011-06-14 | E-GEOD-26589 | biostudies-arrayexpress
TranscriptomicsGenome-scale reconstruction of the PurR regulon reveals its role in the adenine stimulon of Escherichia coli K-12 MG1655
This SuperSeries is composed of the following subset Series: GSE26588: Transcriptome analysis of E. coli MG1655 GSE26589: ChIP-chip of E. coli K-12 MG1655 with antibody against PurR-8myc under various conditions. Refer to individual Series
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2012-01-12 | E-GEOD-26591 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis of E. coli MG1655
Expression profiling of wild type and purR deletion strains of E. coli K-12 MG1655 under both M9 minimal media and addition of adenine. An eight chip study with two different strains under two separate culture conditions.
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2011-06-14 | E-GEOD-26588 | biostudies-arrayexpress
TranscriptomicsChIP-chip of MG1655 with antibody against E. coli RNAP beta subunit under various conditions
We integrated RNAP binding regions (RBRs) and mRNA transcript abundance to determine segments of contiguous transcription originating from promoter regions. To measure RBRs at a genome scale, we employed a ChIP-chip method to E. coli K-12 MG1655 grown in the presence or absence of rifampicin under m...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2009-11-03 | E-GEOD-15588 | biostudies-arrayexpress
UnknownTransient Elastography is Superior to FIB-4 in Assessing the Risk of Hepatocellular Carcinoma in Patients With Chronic Hepatitis B.
Not available
S-EPMC4902391 | biostudies-literature
ProteomicsNaturally processed flucloxacillin haptenated HLA ligands
This study has demonstrated that natural flucloxacillin haptenated HLA-B*57:01 ligands arepresented by antigen presenting cells through multiple pathways. Identification of such epitopes will help to define the chemical signals responsible for drug-induced immunological disease.
ORGANISM(S): Homo sapiens (Human) 
2020-08-05 | PXD020137 | Pride
Dili Hla-b*57:01 Drug hypersensitivity Flucloxacillin 
UnknownA pharmacological master key mechanism that unlocks the selectivity filter gate in K<sup>+</sup> channels.
Not available
S-EPMC6982535 | biostudies-literature
UnknownThe Bacterial Community in Questing Ticks From Khao Yai National Park in Thailand.
Not available
S-EPMC8645651 | biostudies-literature
TranscriptomicsTranscriptome analysis of E.coli MG1655 under multiple growth conditions
Investigation of comprehensive information about the expression level of RNA transcripts across the entire E.coli genome in mulitple growth conditions, including log-phase; stationary phase, heat shock and nitrogen-limiting condition. A fourteen chip study using total RNA recovered from four separa...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2009-11-03 | E-GEOD-15534 | biostudies-arrayexpress
UnknownPredictive validation of qualitative fibrosis staging in patients with chronic hepatitis B on antiviral therapy.
Not available
S-EPMC6821693 | biostudies-literature
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