Park J R JR - OmicsDI

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Unknown (1166)
Proteomics (22)
Transcriptomics (16)
Genomics (14)
Metabolomics (8)
Other (1)

Organisms

Homo sapiens (35)
Mus musculus (4)
Candida albicans (2)
Pseudomonas aeruginosa (1)

Repository

biostudies-arrayexpress (16)
EGA (14)
pride (12)
MassIVE (10)
MetaboLights (8)
GPMDB (1)

Tissue

Epithelial cell (6)
Cell culture (2)
CD8-positive (1)
Embryonic stem cell (1)
Mammary gland tumor cell (1)
Neutrophil (1)
Renal tubule (1)
Spleen (1)

Disease

Breast cancer (7)
Not Available (1)
Papillary renal cell carcinoma (1)

Technology Type

Mass Spectrometry (12)
Shotgun proteomics (9)
Mass spectrometry (8)
Bottom-up proteomics (2)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
Data-dependent acquisition (1)
DiaPASEF (1)
SWATH MS (1)

Instrument Platform

LTQ Orbitrap (6)
LTQ Orbitrap Velos (3)
Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (3)
Orbitrap Fusion (2)
Liquid Chromatography MS - positive - hilic (2)
Instrument (1)
LTQ Orbitrap Elite (1)
Q Exactive Plus (1)
Liquid Chromatography MS (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - hilic (1)
MS Imaging - (1)
Xevo QTof MS (Waters) (1)

Publication Date

2015 (12)
2016 (7)
2023 (7)
2013 (3)
2010 (3)
2026 (3)
2012 (2)
2020 (2)
2011 (1)
2008 (1)
2024 (1)
2017 (1)
2022 (1)
2014 (1)

CHEBI ID

CHEBI:17154 (4)
CHEBI:17405 (4)
CHEBI:25017 (4)
CHEBI:30832 (4)
CHEBI:116314 (3)
CHEBI:15354 (3)
CHEBI:15724 (3)
CHEBI:15729 (3)
CHEBI:15891 (3)
CHEBI:16296 (3)
CHEBI:166465 (3)
CHEBI:16704 (3)
CHEBI:16750 (3)
CHEBI:16796 (3)
CHEBI:16828 (3)
CHEBI:17012 (3)
CHEBI:17191 (3)
CHEBI:17295 (3)
CHEBI:17347 (3)
CHEBI:17351 (3)
CHEBI:17596 (3)
CHEBI:17620 (3)
CHEBI:17650 (3)
CHEBI:17775 (3)
CHEBI:17780 (3)
CHEBI:17987 (3)
CHEBI:18123 (3)
CHEBI:18211 (3)
CHEBI:18347 (3)
CHEBI:18386 (3)

Metabolite Name

Indoleacrylic acid (2)
Skatole (2)
Testosterone (2)
Tryptamine (2)
()-(alpha)-Kainic Acid (1)
()-1-Octen-3-ol (1)
()-Dolichodial (1)
(+)-(S)-6-[4-Chloro-a-(1H-1,2,4-triazol-1-yl)benzyl]-1-methyl-1H-benzotriazole (1)
(+)-(S)-Citalopram oxalate (1)
(+)-10-Deoxymethynolide (1)
(+)-Alantolactone (1)
(+)-Costunolide (1)
(+)-D-Isosorbide (1)
(+)-Etomidate (1)
(+)-Flabellidine (1)
(+)-Fustin (1)
(+)-Gallocatechin (1)
(+)-Lacosamide (1)
(+)-Valencene (1)
(+)-[6]-Gingerol (1)
(+)-aristolochene (1)
(+)-aromadendrin (1)
(+)-beta-selinene (1)
(+)-delta-selinene (1)
(+)-endo-beta-bergamotene (1)
(+)-lariciresinol (1)
(+)-medicarpin (1)
(+)-podocarpic acid (1)
(-)-(S)-Equol (1)
(-)-12(R),13(S)-vernolic acid (1)

Study type

Transcription profiling by array (13)
Genotyping by array (1)
Comparative genomic hybridization by array (1)
Other (1)

Release Date

2021 (122)
2025 (119)
2022 (116)
2020 (97)
2024 (96)
2023 (88)
2018 (76)
2016 (68)
2019 (62)
2017 (61)
2014 (57)
2015 (54)
2013 (42)
2011 (32)
2012 (30)
2010 (19)
2026 (17)
2008 (10)
2009 (9)
2007 (4)
2006 (1)
2003 (1)
2002 (1)

Lab affiliation

Univeristy College Dublin (6)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
CMMB, University of South Florida (1)
Department of Molecular Biology, Cristea Lab, Princeton University, Princeton, NJ, US (lab head) (1)
Proteomics Core Facility, Sahlgrenska Akademy, University of Gothenburg, Sweden (1)
Sahlgrenska Center for Cancer Research, Department of Surgery, Institute of Clinical Sciences, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden (1)
Scripps Research Institute (1)

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Blockade of RAGE ameliorates elastase-induced emphysema development and progression via RAGE-DAMP signaling.

Not available

S-EPMC5388549 | biostudies-literature

A decade of faculty development for health professions educators: lessons learned from the Macy Faculty Scholars Program.

Not available

S-EPMC10041479 | biostudies-literature

Prioritizing Environmental Chemicals for Obesity and Diabetes Outcomes Research: A Screening Approach Using ToxCast™ High-Throughput Data.

Not available

S-EPMC4977057 | biostudies-literature

A polyamine-centric blood-based metabolite panel predictive of poor response to CAR T-cell therapy in large B cell lymphoma

Anti-CD19 chimeric antigen receptor (CAR) T-cell therapy for relapsed or refractory (r/r) large B-cell lymphoma (LBCL) results in durable response in only a subset of patients. MYC overexpression in LBCL tumors is associated with poor response to treatment. We tested whether a MYC-driven polyamin...

2022-10-31 | MTBLS5381 | MetaboLights

Randomized, phase III trial of first-line figitumumab in combination with paclitaxel and carboplatin versus paclitaxel and carboplatin alone in patients with advanced non-small-cell lung cancer.

Not available

S-EPMC4067944 | biostudies-literature

mirTarRnaSeq: An R/Bioconductor Statistical Package for miRNA-mRNA Target Identification and Interaction Analysis.

Not available

S-EPMC9191533 | biostudies-literature

Early Relapse of Follicular Lymphoma After Rituximab Plus Cyclophosphamide, Doxorubicin, Vincristine, and Prednisone Defines Patients at High Risk for Death: An Analysis From the National LymphoCare Study.

Not available

S-EPMC4879714 | biostudies-literature

Transcription profiling of human substantia nigra from postmortem brain of Parkinsons disease patients (PD)

We used microarrays to detail the global program of gene expression underlying Parkinson's disease Experiment Overall Design: Substantia nigra tissue from postmortem brain of normal and Parkinson disease patients were used for RNA extraction and hybridization on Affymetrix microarrays: 9 replicates ...

ORGANISM(S): Homo sapiens

2008-11-06 | E-GEOD-7621 | biostudies-arrayexpress

Crystal structure of the Marburg virus GP2 core domain in its postfusion conformation.

Not available

S-EPMC3464016 | biostudies-literature

Synthesis, Tumor Specificity, and Photosensitizing Efficacy of Erlotinib-Conjugated Chlorins and Bacteriochlorins: Identification of a Highly Effective Candidate for Photodynamic Therapy of Cancer.

Not available

S-EPMC9125565 | biostudies-literature