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ProteomicsSuccinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440.
The impact of the conjugative plasmid pCAR1, which is involved in carbazole degradation, on the succinylome of host Pseudomonas putida KT2440 was investigated using a stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative analysis. This dataset is related to PXD007089.
ORGANISM(S): Pseudomonas putida KT2440 
2018-11-21 | PXD007133 | Pride
Lc-msms Silac Pcar1 Pseudomonas putida kt2440 
ProteomicsSuccinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440 (2).
The impact of the conjugative plasmid pCAR1, which is involved in carbazole degradation, on the succinylome of host Pseudomonas putida KT2440 was investigated using a stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative analysis. This dataset is related to PXD007090.
ORGANISM(S): Pseudomonas putida KT2440 
2018-11-21 | PXD007722 | Pride
Lc-msms Silac Pcar1 Pseudomonas putida kt2440 
ProteomicsProteome, acetylome and succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440
The impact of the conjugative plasmid pCAR1, which is involved in carbazole degradation, on the proteome, acetylome, and succinylome of host Pseudomonas putida KT2440 was investigated using a stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative analysis.
ORGANISM(S): Pseudomonas putida KT2440 
2018-09-24 | PXD007089 | Pride
Lc-msms Silac Pcar1 Pseudomonas putida kt2440 
ProteomicsProteome, acetylome and succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440 (2)
The impact of the conjugative plasmid pCAR1, which is involved in carbazole degradation, on the proteome, acetylome, and succinylome of host Pseudomonas putida KT2440 was investigated using a stable isotope labeling by amino acids in cell culture (SILAC)-based quantitative analysis.
ORGANISM(S): Pseudomonas putida KT2440 
2018-11-22 | PXD007090 | Pride
Lc-msms Silac Pcar1 Pseudomonas putida kt2440 
TranscriptomicsEffects of carbazole-degradative plasmid pCAR1 on biofilm morphology in three Pseudomonas strains.
To elucidate the impact of the carriage of carbazole-degradative plasmid pCAR1 on biofilm formation by host bacteria, we compared biofilm morphology of pCAR1-free and pCAR1-carrying three Pseudomonas hosts: P. putida KT2440, P. aeruginosa PAO1 and P. fluorescens Pf0-1 using confocal laser scanning m...
ORGANISM(S): Pseudomonas putida 
2014-05-08 | E-GEOD-56856 | biostudies-arrayexpress
TranscriptomicsAlterations of RNA maps of IncP-7 plasmid pCAR1 in various Pseudomonas bacteria.
RNA mapping on pCAR1 carried by KT2440, CA10, PAO1, Pf0-1, HS01, and JCM 2778 6 strains/biological entities were compared
ORGANISM(S): Pseudomonas aeruginosa 
2011-10-10 | E-GEOD-28568 | biostudies-arrayexpress
TranscriptomicsModulation of primary cell function of host Pseudomonas bacteria by conjugative plasmid pCAR1
Impacts of plasmid carriage on its host cell were comprehensively analyzed using conjugative plasmid pCAR1 in the three different kinds of hosts, Pseudomonas putida KT2440, P. aeruginosa PAO1, and P. fluorescens Pf0-1. Various analyses of the host phenotype showed that pCAR1 carriage reduced host fi...
ORGANISM(S): Pseudomonas putida 
2012-12-25 | E-GEOD-39636 | biostudies-arrayexpress
TranscriptomicsCooperative function of the three different kinds of nucleoid-associated proteins encoded on the IncP-7 plasmid pCAR1 [pCAR1 plasmid chip]
Nucleoid-associated proteins (NAPs) are known to fold bacterial DNA and influence global transcription. Incompatibility P-7 plasmid pCAR1 carries three genes encoding NAPs: H-NS family protein Pmr, NdpA-like protein Pnd, and HU-like protein Phu. Because previous reports about plasmid-encoded NAPs ma...
ORGANISM(S): Pseudomonas putida 
2013-12-07 | E-GEOD-53068 | biostudies-arrayexpress
TranscriptomicsMvaT family proteins encoded on IncP-7 plasmid pCAR1 and the host chromosome regulate host transcriptome cooperatively but differently (pCAR1)
MvaT proteins are recognized as a member of H-NS family proteins in pseudomonads. IncP-7 conjugative plasmid pCAR1, which was originally found in Pseudomonas resinovorans, carries an mvaT homologous gene, pmr. In Pseudomonas putida KT2440 bearing pCAR1, it was previously reported that pmr and chromo...
ORGANISM(S): Pseudomonas putida 
2015-09-03 | E-GEOD-72638 | biostudies-arrayexpress
GenomicsHigh-resolution mapping of the pCAR1 plasmid transcriptomes in Pseudomonas
High-resolution mapping of the pCAR1 plasmid transcriptomes in Pseudomonas
PRJNA107363 | ENA
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