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MetabolomicsEvaluation of ambient mass spectrometry tools for assessing inherent postharvest pepper quality

Horticulturists are interested in evaluating how cultivar, environment, or production system inputs can affect postharvest quality. Ambient mass spectrometry approaches enable analysis of minimally processed samples under ambient conditions and offer an attractive high-throughput alternative for ...

2022-03-04 | MTBLS2587 | MetaboLights
MetabolomicsThe Cd-tolerance of pepper (Capsicum annuum L.) is linked with rhizosphere bacterial community composition and rhizosphere soil metabolites profiles

Cadmium (Cd) poses a serious threat to plant growth, so the selection and breeding of Cd-tolerant pepper cultivars is an effective method to reduce Cd hazards. This study identified C. annuum G03 as a Cd-tolerant cultivar, evidenced by its superior leaf physiological activity under Cd stress comp...

2025-10-23 | MTBLS13200 | MetaboLights
MetabolomicsGlobal transcription and metabolic profiles of five tissues in pepper fruits

The sample to be tested was fully ground into powder in the grinder, 50 mg of the sample was freeze-dried, 1000 μL of the extraction solution containing the inner target was added (methanol:acetonitrile:water, 2:2:1, v/v/v, internal standard concentration 20 mg/L) and vortex mixed for 30 s; then ...

2024-07-12 | MTBLS10002 | MetaboLights
TranscriptomicsDynamics of the chili pepper transcriptome during fruit development
Background The set of all mRNA molecules present in a cell constitute the transcriptome. The transcriptome varies depending on cell type as well as in response to internal and external stimuli during development. Chili pepper is an economically and culturally important horticultural crop as well as ...
ORGANISM(S): Capsicum annuum 
2014-02-21 | E-GEOD-54123 | biostudies-arrayexpress
TranscriptomicsIdentification and characterization of microRNAs in pepper from 10 tissue samples by high-throughput sequencing
High-throughput sequencing was employed to identify microRNAs in pepper from 10 tissue samples 10 sample examined
ORGANISM(S): Capsicum annuum 
2013-08-08 | E-GEOD-41654 | biostudies-arrayexpress
TranscriptomicsPepper leaf transcriptome profiling during an incompatible and a compatible pepper-tobamovirus interaction
Upon virus infections, the transcriptomic profile of host plants markedly changes. The rapid and comprehensive transcriptional reprogramming is critical to ward off virus attack. To learn more about transcriptional reprogramming in tobamovirus-infected pepper leaves, we carried out transcriptome-wid...
ORGANISM(S): Capsicum annuum 
2021-07-23 | E-MTAB-10769 | biostudies-arrayexpress
ProteomicsiTRAQ-based quantitative proteomic analysis of heat stress-induced mechanisms in pepper seedlings
iTRAQ-based quantitative proteomic analysis of heat stress-induced mechanisms in pepper seedlings
ORGANISM(S): Capsicum annuum 
2021-05-06 | PXD019556 | Pride
Heat stress Pepper Proteomic 
TranscriptomicsTranscriptome Sequencing and De Novo Analysis of a Cytoplasmic Male Sterile Line and Its Near-Isogenic Restorer Line in Chili Pepper (Capsicum annuum L.)
Background: The use of cytoplasmic male sterility (CMS) in F1 hybrid seed production of chili pepper is increasingly popular. However, the molecular mechanisms of cytoplasmic male sterility and fertility restoration remain poorly understood due to limited transcriptomic and genomic data. Therefore, ...
ORGANISM(S): Capsicum annuum 
2013-07-03 | E-GEOD-45431 | biostudies-arrayexpress
TranscriptomicsSmall RNA sequencing analysis of pepper
To facilitate the functional annotation of the pepper genome, analysis of miRNAs was performed for the sequenced data from five small RNA libraries described above, representing five different tissues. Starting with a set of 5,436 plant mature miRNA sequences available in miRBase, we annotated with ...
ORGANISM(S): Capsicum annuum 
2014-03-14 | E-GEOD-45040 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis and molecular marker discovery in red pepper, Capsicum annuum L. TF68
Transcriptome from high throughput sequencing-by-synthesis is a good resource of molecular markers. In this study, we present utility of massively parallel sequencing by synthesis for profiling the transcriptome of red pepper (Capsicum annuum L. TF68) by 454 GS-FLX pyrosequencing. Through the genera...
ORGANISM(S): Capsicum annuum 
2011-09-08 | E-GEOD-29215 | biostudies-arrayexpress
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