Peptide-membrane interaction

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Unknown (1309)
Transcriptomics (312)
Proteomics (238)
Genomics (125)
Metabolomics (14)
Models (1)
Other (1)

Organisms

Homo sapiens (186)
Mus musculus (111)
Arabidopsis thaliana (20)
Drosophila melanogaster (19)
Saccharomyces cerevisiae (14)
Escherichia coli (10)
Caenorhabditis elegans (9)
Zea mays (6)
Schizosaccharomyces pombe (5)
Rattus norvegicus (5)
Staphylococcus aureus (5)
Bos taurus (4)
Rhizobium leguminosarum (3)
Candida albicans (3)
Sus scrofa (3)
Tetrahymena thermophila (2)
Listeria monocytogenes EGD-e (2)
Campylobacter jejuni (2)
Helicobacter pylori (2)
Streptomyces venezuelae (2)
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Salmo salar (2)
Solanum lycopersicum (2)
Gallus gallus (2)
Corynebacterium glutamicum ATCC 13032 (2)
Eukaryota (1)
Campylobacter jejuni subsp. jejuni 81-176 (1)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
Ascaris suum (1)
Listeria monocytogenes serotype 4b str. F2365 (1)

Organisms

Mus musculus (3)
Homo sapiens (3)
Arundo donax (1)
Trichoplusia ni (1)
Human respirovirus 3 (1)
human skin metagenome (1)
Escherichia coli (1)
Staphylococcus aureus (1)
Danio rerio (1)
Plasmodium falciparum (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (414)
pride (136)
MassIVE (38)
jPOST (28)
ENA (21)
MetaboLights (14)
geo (10)
iProX (10)
PanoramaPublic (7)
PAXDB (5)
PeptideAtlas (4)
EGA (3)
BioModels (1)
GPMDB (1)

Tissue

Cell culture (28)
Epithelial cell (9)
B cell (9)
Brain (6)
Blood plasma (6)
Blood (6)
Cell suspension culture (5)
Kidney (4)
Heart (3)
Root (3)
Blood cell (3)
Endothelial cell (2)
Keratinocyte (2)
Extracellular vesicle (2)
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Blood serum (2)
Cell line cell (2)
HeLa cell (2)
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Left atrium (1)
Cardiac muscle tissue of atrium (1)
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K-562 cell (1)
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Tetanus (1)
Diphtheria (1)
Epstein-Barr virus hepatitis (1)
Preeclampsia (1)
Severe diarrhea (1)
Parasitic infectious disease (1)
Pneumonia (1)
Myocardial infarction (1)
Inflammation (1)
Pancreatitis (1)
Carcinoma (1)
Fanconi anemia (1)

Technology Type

Mass Spectrometry (136)
Shotgun proteomics (71)
Bottom-up proteomics (28)
Affinity purification coupled with mass spectrometry proteomics (20)
Data-dependent acquisition (12)
Mass spectrometry (11)
Gel-based experiment (10)
Chemical cross-linking coupled with mass spectrometry proteomics (10)
Data-independent acquisition (7)
SWATH MS (5)
HDMSE (4)
Mass spectrometry assay (2)
Metaproteomics (2)
Affinity proteomics (2)
MSE (2)
SRM/MRM (2)
Illumina DASL Assay (1)
ILLUMINA, Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
DiaPASEF (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (7)
Illumina HiSeq 2500 (6)
NextSeq 500 (5)
Illumina MiSeq (4)
Illumina HiSeq 1500 (3)
NextSeq 550 (3)
Illumina HiSeq 2000 (3)
Illumina Genome Analyzer II (2)
Illumina NovaSeq X (2)
NextSeq 2000 (2)
Illumina HiSeq 1000 (2)
Illumina HiSeq 4000 (2)
-- (1)
Nanodrop 2000c spectrophotometer (1)
Thermocycler; SPRI magnetic bead rack; Qubit fluorometer; Agilent Bioanalyzer (1)
Branson Digital Sonifier; refrigerated benchtop centrifuge; rotator; magnetic rack (1)
Controlled-environment growth chambers (long-day and short-day) (1)
Dissection tools; liquid nitrogen; −80 °C freezer (1)
Beadarray reader (1)
Axon GenePix4000B (1)
Solexa 2G Genome Analyzer (1)
Agilent DNA Microarray Scanner (1)
ScanArray 4000 [PerkinElmer] (1)
ScanArray Express HT [PerkinElmer] (1)
ScanArray 4000XL [PerkinElmer] (1)
GenePix 4000B (1)
MinION (1)
HiSeq X Ten (1)
Illumina HiSeq 3000 (1)
Instrument (1)

Publication Date

2014 (64)
2015 (58)
2013 (57)
2010 (56)
2024 (36)
2012 (36)
2021 (34)
2026 (33)
2025 (33)
2022 (29)
2016 (29)
2011 (29)
2020 (25)
2023 (24)
2009 (24)
2019 (23)
2008 (22)
2018 (15)
2007 (11)
2017 (8)
2005 (7)
2006 (5)

UNIPROT ID/AC

E0CYZ8_MOUSE (3)
TCL1A_MOUSE (3)
A14EL_MOUSE (3)
TSX_MOUSE (3)
ATG12_MOUSE (3)
RPAB2_MOUSE (3)
DPPA4_MOUSE (3)
S1PBP_MOUSE (3)
ZN287_MOUSE (3)
RPP25_MOUSE (3)
TCAL8_MOUSE (3)
DPA5A_MOUSE (3)
F10C1_MOUSE (3)
SKA2_MOUSE (3)
TYDP2_MOUSE (3)
RBIS_MOUSE (3)
SPC25_MOUSE (3)
GON7_MOUSE (3)
PALM3_MOUSE (3)
CBPC3_MOUSE (3)
BICRL_MOUSE (3)
MTF1_MOUSE (3)
RTEL1_MOUSE (3)
AEBP2_MOUSE (3)
CB076_MOUSE (3)
RN138_MOUSE (3)
AF10_MOUSE (3)
PCGF5_MOUSE (3)
P04070 (1)
P12259 (1)

CHEBI ID

CHEBI:25017 (2)
CHEBI:27266 (2)
CHEBI:16919 (2)
CHEBI:85478 (1)
CHEBI:16326 (1)
CHEBI:57865 (1)
CHEBI:58115 (1)
CHEBI:137554 (1)
CHEBI:137551 (1)
CHEBI:456215 (1)
CHEBI:137552 (1)
CHEBI:83362 (1)
CHEBI:83361 (1)
CHEBI:83172 (1)
CHEBI:85595 (1)
CHEBI:85601 (1)
CHEBI:85600 (1)
CHEBI:85599 (1)
CHEBI:85626 (1)
CHEBI:85597 (1)
CHEBI:67082 (1)
CHEBI:67084 (1)
CHEBI:67085 (1)
CHEBI:85590 (1)
CHEBI:85588 (1)
CHEBI:85584 (1)
CHEBI:85583 (1)
CHEBI:85582 (1)
CHEBI:85570 (1)
CHEBI:72348 (1)

Metabolite Name

PC(16:0/16:0) (3)
Cer(d18:1/16:0) (3)
Ornithine (3)
Cytosine (3)
Creatine (3)
PC(17:0/17:0) (2)
LysoPC(22:1(13Z)) (2)
Hypotaurine (2)
LysoPC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (2)
PC(15:0/15:0) (2)
PC(14:0/16:0) (2)
PE(P-18:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (2)
SM(d18:1/22:0) (2)
SM(d18:1/20:0) (2)
SM(d18:0/18:1(9Z)) (2)
Leucine (2)
SM(d18:1/14:0) (2)
Glycine (2)
Valine (2)
Niacinamide (2)
Deoxyuridine (2)
Citrulline (2)
Glutathione (2)
Choline (2)
Adenosine (2)
Succinate (2)
Isoleucine (2)
Cytidine (2)
Creatinine (2)
L-Carnitine (2)

First Public Date

2025 (4)
2024 (4)
2026 (3)
2022 (2)
2014 (2)
2023 (1)
2021 (1)
2019 (1)
2016 (1)
2015 (1)
2013 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

Dept. of Laboratory Medicine, University of California, San Francisco, CA (3)
Department of Molecular Pathology, Faculty of Military Health Sciences, University of Defense, Hradec Kralove, Czech Republic (2)
Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany (2)
Department of Chemistry & Chemical Biology, Northeastern University (2)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (2)
Functional Proteomics Lab, Faculty of Biology, University of Freiburg, Germany (2)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (2)
Wellcome Trust Sanger Institute (2)
Department of Laboratory Medicine, Institute of Biomedicine, University of Gothenburg, Sweden. Laboratory of Clinical Chemistry, Sahlgrenska University Hospital, Gothenburg, Sweden (1)
1 Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands 2 Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Laboratory for Neuropathology, Department of Imaging and Pathology, KU Leuven (University of Leuven), Leuven, Belgium;Leuven Brain Institute (LBI), KU Leuven (University of Leuven), Leuven, Belgium;Department of Imaging & Pathology, UZ Leuven (University Hospital Leuven), Leuven, Belgium. (1)
DGIST, Department of new biology, Q-Bio laboratory (1)
Zbynek Zdrahal, Research group Proteomics, CEITEC-MU, Masaryk University, Kamenice 5, 625 00, Brno, Czech Republic (1)
Proteome Dynamics, Max Delbrück Center for Molecular Medicine, Robert-Rössle-Str. 10, D-13092 Berlin, Germany Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany (1)
Jilin Medical University (1)
PRBB, Institute of Evolutionary Biology (UPF-CSIC), Dr. Aiguader 88, 8003 Barcelona, Spain Catalan Institution of Research and Advanced Studies (ICREA), Passeig de Lluís Companys, 23, 08010, Barcelona, Spain Centro Nacional de Análisis Genómico (CNAG), Baldiri i Reixac 4, 08028 Barcelona, Spain Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain (1)
Center for Addiction Research Department of Pharmacology and Toxicology The University of Texas Medical Branch Galveston, TX 77555 (1)
The Australian Proteome Analysis Facility (APAF) is a service and research facility which is part of the Macquarie Analytical and Fabrication Facility (MAFF) within Macquarie University. (1)
Center for Proteomics & Artificial Intelligence Center for Clinical Mass Spectrometry Allegheny Health Network Cancer Institute 100 S Jackson Ave., Pittsburgh, PA 15202 (1)
Universität Hohenheim, Department of Plant Systems Biology (1)
Duke University, Albert Eye Research Institute (1)
Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil (1)
Department of biochemistry, Federal University of São Paulo, Brazil (1)
Head of Proteomics Plattform Department of Health Sciences and Technology Institute of Molecular Systems Biology ETH Zurich Switzerland (1)
Department of Obstetrics, University and University Hospital of Zurich, Zurich, Switzerland (1)
Andalusian CenterforGrapeandGrapevineResearch,CeiA3,MarineandEnvironmentalSciencesFaculty,Laboratory of Microbiology,UniversityofCadiz (UCA),PuertoReal,11510Cádiz,Spain (1)
Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland (1)
Centre for Animal Science Queensland Alliance for Agriculture and Food Innovation, University of Queensland, Australia (1)
Medizinisches Proteom-Center, Ruhr-Universität Bochum (1)
Head Proteomics Platform, MDC Berlin (1)

IsPrivate

False (1)

Classification

bacteria (2)
viruses (1)
protozoa (1)

Modification

3x(2)H labeled N6-acetyl-L-lysine (1)
15.994915 (1)
N6 (1)
4x(15)N labeled L-arginine (1)
N6-dimethyl-L-lysine (1)
57.021464 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (165)
ChIP-seq (91)
RNA-seq of coding RNA (46)
ChIP-chip by tiling array (32)
ChIP-chip by array (14)
Other (10)
Proteomic profiling by array (9)
Methylation profiling by high throughput sequencing (8)
Unknown experiment type (7)
Comparative genomic hybridization by array (5)
RIP-seq (4)
RNA-seq of non coding RNA (3)
Cell line - High-throughput sequencing (2)
Transcription profiling by tiling array (2)
Hi-C (2)
DNA-seq (2)
Methylation profiling by array (2)
RNA-seq of coding RNA from single cells (2)
RIP-chip by array (1)
High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Transcription profiling by RT-PCR (1)
Single nucleus RNA sequencing (1)
CUT&RUN (1)
RNA-seq of total RNA (1)

Release Date

2015 (124)
2014 (118)
2021 (109)
2022 (107)
2020 (104)
2010 (104)
2025 (99)
2013 (90)
2019 (89)
2023 (85)
2017 (83)
2024 (81)
2016 (78)
2011 (76)
2012 (72)
2018 (68)
2009 (60)
2008 (50)
2007 (26)
2005 (26)
2026 (20)
2006 (16)
2004 (11)
2002 (7)
2003 (6)
2001 (5)
1998 (3)
1997 (3)
1999 (1)
1996 (1)

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Role of the internal disulfide bond in altering the binding properties of SARS-CoV-2 membrane binding peptide to lipid bilayer

The SARS-CoV-2 spike protein’s membrane-binding domain bridges the viral and host cell membrane, a critical step in triggering membrane fusion. we investigate how the SARS-CoV-2 spike protein interacts with host cell membranes, focusing on a membrane-binding peptide (MBP) located near the TMPRSS2 cl...

ORGANISM(S): Coronaviridae sp.

2025-05-07 | PXD057533 | Pride

The structural dynamics of the flavivirus fusion peptide-membrane interaction.

Not available

S-EPMC3477123 | biostudies-literature

Influence of Peptide Conjugation Sites on Lunatin-Alumina Nanoparticles: Implications for Membrane Interaction and Antimicrobial Activity.

Not available

S-EPMC12299903 | biostudies-literature

Membrane interaction and structure of the transmembrane domain of influenza hemagglutinin and its fusion peptide complex.

Not available

S-EPMC2267159 | biostudies-literature

N-Terminal Charged Residues of Amyloid-β Peptide Modulate Amyloidogenesis and Interaction with Lipid Membrane.

Not available

S-EPMC6035087 | biostudies-literature

Computational investigation of the effect of BODIPY labelling on peptide-membrane interaction.

Not available

S-EPMC11557973 | biostudies-literature

SARS-CoV-2 spike fusion peptide trans interaction with phosphatidylserine lipid triggers membrane fusion for viral entry.

Not available

S-EPMC11389415 | biostudies-literature

Effect of rBTNL2.Fc co-stimulation on murine CD4+ cells

Naïve T cell activation involves at least two signals from an antigen presenting cell (APC), one through the T cell receptor via interaction with APC peptide-MHC complexes and a second through interaction of CD28 with APC B7 ligands. Following activation, T cells up-regulate a host of other membran...

ORGANISM(S): Mus musculus

2013-01-31 | E-GEOD-42385 | biostudies-arrayexpress

Mechanistic insights into the pH-dependent membrane peptide ATRAM.

Not available

S-EPMC6408977 | biostudies-literature

Inhibition of K-Ras4B-plasma membrane association with a membrane microdomain-targeting peptide.

Not available

S-EPMC8145430 | biostudies-literature

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