Phagocytes - OmicsDI

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unidentified (2)
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Organisms

Mus musculus (179)
Homo sapiens (73)
Schmidtea mediterranea (5)
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 (4)
Rattus norvegicus (4)
Cricetulus griseus (3)
Candida albicans (3)
Francisella tularensis (2)
Cryptococcus neoformans (2)
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Gallus gallus (2)
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Ehrlichia chaffeensis str. Arkansas (1)
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CHEBI ID

CHEBI: 15940 (1)

Metabolite Name

Nicotinic acid (1)

First Public Date

2014 (53)
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Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Department of Molecular Pathology and Biology, Faculty of Military Health Sciences, University of Defence, Trebesska 1575, 500 01 Hradec Kralove, Czech Republic (2)
Emory University School of Medicine Departments of Biochemistry and Neurology (2)
1) Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology – Hans Knöll Institute, Jena, Germany 2) Department of Microbiology and Molecular Biology, Friedrich Schiller University, Jena, Germany (1)
1. Department of Biochemistry and Chemistry, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, Victoria 3086, Australia. 2. Research Centre for Extracellular Vesicles, La Trobe University, Victoria, Australia. (1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
Assistant Professor Chemistry and Biochemistry University of Texas at Arlington Box 19065 700 Planetarium Place, Room 130 Arlington, TX 76019 United States (1)
Biomedical Research Centre, University Hospital Hradec Kralove, Sokolska 581, 500 05 Hradec Kralove, Czech Republic (1)
Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom (1)
Cambridge Institute of Therapeutic Immunology and Infectious Disease (CITIID), University of Cambridge, Cambridge, UK (1)
Cedars-Sinai Medical Center Los Angeles, CA 90048 (1)
College of Veterinary Medicine, South China Agricultural University, Guangzhou, China (1)
Departamento de Microbiología II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biomedical Sciences, University of Padova, Italy (1)
Department of Blood Cell Research, Sanquin Research and Laboratory Services and Landsteiner Laboratory, Amsterdam University Medical Center (AUMC), University of Amsterdam, Amsterdam, The Netherlands and Department of Pediatric Immunology, Rheumatology and Infectious Diseases, Emma Children’s Hospital, AUMC, University of Amsterdam, Amsterdam, The Netherlands. (1)
Department of Chemistry, Stanford University Howard Hughes Medical Institute, Stanford University (1)
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Dept. Chemical Proteomics, Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology (SIAT), Chinese Academy of Sciences (1)
Dept. of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark. (1)
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Independent Research group Leader Experimental Systems Immunology Max Planck insitute of Biochemistry Martinsried, Germany (1)
Institute of Biomedicine, Department of Microbiology, the Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden (1)
Institute of Microbiology of the CAS, v. v. i. (1)
Institute of Microbiology of the Czech Academy of Sciences, v.v.i., Videnska 1083, 142 20 Prague, Czech Republic (1)
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Instituto Biomédico, Departamento de Microbiologia e Parasitologia – MIP, Universidade Federal Fluminense, Rua Prof. Hernani Pires de Melo 101, São Domingos, Niterói-RJ, Brazil, ZipCode 24210-130, Phone: +55 21 2629-2410 (1)

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False (2)

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Classification

bacteria (22)
fungi (6)
protozoa (2)

Study type

Transcription profiling by array (81)
RNA-seq of coding RNA (6)
Unknown experiment type (5)
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Other (2)
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Systematic identification of bacterial factors driving Staphylococcus aureus intracellular lifestyle in non-professional phagocytes

Staphylococcus aureus is a major human pathogen responsible for severe infections. While traditionally described as extracellular, increasing evidence establishes S. aureus as a facultative intracellular pathogen. Intracellularity contributes to immune evasion, dissemination, and antibiotic failu...

2025-10-26 | MTBLS13220 | MetaboLights

Expression analysis of purified intestinal phagocytes in Schmidtea mediterranea

Identification of differentially expressed genes in intestinal phagocytes, compared to non-intestinal cells in Schmidtea mediterranea. Total RNA was isolated from either intestinal phagocytes or non-intestinal cells (control). Four independent biological replicates were conducted with two dye swaps....

ORGANISM(S): Schmidtea mediterranea

2012-10-01 | E-GEOD-35565 | biostudies-arrayexpress

quantitative proteomic analysis of phagocytes in oyster Crassostrea gigas

Invertebrates lack the adaptive immune system homologous to that of vertebrates, thus depend exceptionally on the innate immune system for the pathogen recognition and clearance. Phagocytes play a pivotal role in the innate immunity of invertebrates, but the molecular basis underlying their phagocyt...

ORGANISM(S): Crassostrea Gigas

2018-05-29 | PXD009987 |

Expression profiling of murine E10.5 TLR2+ CD11b+ embryonic phagocytes by comparative microarray analyses

The detection of Toll-like receptor 2 (TLR2) expression on E10.5 early embryonic phagocytes prompted us to determine the list of markers co-expressed with TLR2 in a cell-type specific manner. Thus, a comparative expression profiling of cDNAs between murine E10.5 TLR2+ CD11b+ embryonic cells and TLR2...

ORGANISM(S): Mus musculus

2014-12-01 | E-MTAB-1537 | biostudies-arrayexpress

ImmGen ULI: OpenSource Mononuclear Phagocytes Project

PRJNA503607 | ENA

Mononuclear phagocytes in neonatal Peyer's patches

PRJNA779989 | ENA

Human iPSC-derived mononuclear phagocytes restore cognition, neural health, and a subpopulation of hippocampal mossy cells in aging mice

Young blood or plasma and young bone marrow improves cognitive function in aged animals, though the cell type responsible for these regenerative effects remains unknown. This study evaluated the potential of induced pluripotent stem cell-derived mononuclear phagocytes (iMPs) as a therapeutic for ag...

ORGANISM(S): Mus musculus (Mouse)

2025-11-10 | PXD052723 | Pride

Identification of Fcmr-dependent heterogeneity in tumor associated mononuclear phagocytes

PRJNA534528 | ENA

Sorted Mouse Phagocytes RNAseq

PRJNA417315 | ENA

Mononuclear phagocyte phenotypes in a multiple sclerosis model

Mononuclear phagocytes are key regulators of both tissue damage and repair in neuroinflammatory conditions such as multiple sclerosis (MS). To examine divergent phagocyte phenotypes in the inflamed central nervous system (CNS) we introduce an in vivo imaging approach combined with RNAseq and proteom...

ORGANISM(S): Mus musculus (Mouse)

2019-07-10 | PXD010245 | Pride

Mononuclear pahgocytes Macrophage Central nervous system Experimental autoimmune encephalomyelitis Multiple sclerosis Microglia

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