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ProteomicsQuantitative proteomic dataset from oro- and naso-pharyngeal swabs used for COVID-19 diagnosis: detection of viral proteins and host’s biological processes altered by the infection
We recovered proteins from SARS-CoV-2 positive and negative oro/naso-pharyngeal swabs, obtained from diagnostic center localized at Institut Pasteur de Montevideo, and performed comparative quantitative proteomic analysis.
ORGANISM(S): Homo sapiens (Human) SARS bat coronavirus 
2020-07-28 | PXD020394 | Pride
Covid-19 Proteomics Sars-cov-2 
ProteomicsLC-MS/MS proteomic analysis of pharyngeal swabs and plasma from MHV-infected and uninfected mice
Recent developments have broadened our perception of SARS-CoV-2, indicating its capability to affect the body systemically beyond its initial recognition as a mere respiratory pathogen. However, the pathways of its widespread are not well-understood. Employing a dual-modality approach, we integrated...
ORGANISM(S): Severe acute respiratory syndrome coronavirus 2 Mus musculus (Mouse) 
2024-12-11 | PXD054355 | Pride
Pharyngeal swabs Mus musculus Mhv Plasma Lc-m/ms 
TranscriptomicsInteractome analysis of longitudinal pharyngeal infection of cynomolgus macaques by group A Streptococcus
Relatively little is understood about the dynamics of global host–pathogen transcriptome changes that occur during bacterial infection of mucosal surfaces. To test the hypothesis that group A Streptococcus (GAS) infection of the oropharynx provokes a host transcriptome response, we performed genom...
ORGANISM(S): Macaca fascicularis 
2010-03-18 | E-GEOD-20262 | biostudies-arrayexpress
ProteomicsComparative proteomics of human naso-oropharyngeal swabs from COVID19 patients for identification of potential biomarker candidates
Background: COVID-19 has been a global pandemic affecting millions since March 2020. Both as a disease and as a syndrome, COVID19 mimics a number of other clinical entities. Also, current set of investigations such as RT-PCR and antibody based assays are not that efficient in diagnosis of the diseas...
ORGANISM(S): Homo sapiens (Human) 
2026-08-24 | PXD067986 | Pride
Sars-cov-2 peptides Lc-ms/ms proteomics Glycolysis and immunity dysregulation Covid-19 Biomarkers 
UnknownDo isolates from pharyngeal and rectal swabs match blood culture bacterial pathogens in septic VLBW infants? A pilot, cross-sectional study.
Not available
S-EPMC7886719 | biostudies-literature
Genomics
Nasal pharyngeal swab viral metagenomics
PRJNA701833 | ENA
UnknownPharyngeal microbiome alterations during Neisseria gonorrhoeae infection.
Not available
S-EPMC6984747 | biostudies-literature
UnknownApplication of an optimized pharyngeal swab-assisted device in pharyngeal sampling for COVID-19 patients.
Not available
S-EPMC7944259 | biostudies-literature
UnknownGenome Sequences of Anelloviruses, Genomovirus, and Papillomavirus Isolated from Nasal Pharyngeal Swabs.
Not available
S-EPMC9476932 | biostudies-literature
UnknownQuantitative proteomic dataset from oro- and naso-pharyngeal swabs used for COVID-19 diagnosis: Detection of viral proteins and host's biological processes altered by the infection.
Not available
S-EPMC7405904 | biostudies-literature
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