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MetabolomicsPiriformospora indica stimulates root metabolism of Arabidopsis thaliana
Piriformospora indica is a root-colonizing fungus, which interacts with a variety of plants including Arabidopsis thaliana. This interaction has been considered as mutualistic, as it leads to an increased mycelia dry weight and increased shoot fresh weight, respectively. So far, only indolic glucosi...
2016-07-15 | MTBLS341 | MetaboLights
TranscriptomicsBarley root gene expression during colonisation by Piriformospora indica
The fungal mutualist Piriformospora indica is colonising barley roots thereby mediating various beneficial effects to its host. The interaction is characterised by an initial biotrophic interaction stage which is followed by a cell death-dependent colonisation phase. We used microarrays to identify ...
ORGANISM(S): Hordeum vulgare 
2010-05-19 | E-GEOD-13756 | biostudies-arrayexpress
TranscriptomicsPiriformospora indica on Arabidopsis and barley root material
Broad-host root endophytes establish long-term interactions with a large variety of plants, thereby playing a significant role in natural and managed ecosystems and in evolution of land plants. To exploit plants as living substrates and to establish a compatible interaction with morphologically and ...
ORGANISM(S): Piriformospora indica 
2013-07-22 | E-GEOD-47775 | biostudies-arrayexpress
ProteomicsArabidopsis thaliana responds to colonisation of Piriformospora indica by secretion of symbiosis specific proteins
Plants interact with a wide variety of fungi in a mutualistic, parasitic or neutral way. The associations formed depend on the exchange of nutrients and signalling molecules between the partners. The latter include a diverse set of protein classes, of which some have been demonstrated to be function...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Piriformospora sp. 
2019-01-07 | PXD009563 | Pride
Scopolin Piriformospora indica Er body Plat Secretome 
TranscriptomicsmRNA-seq of Brachypodium distachyon roots inoculated with Serendipita indica (syn. Piriformospora indica)
We sequenced mRNA and small RNA (sRNA) profiles in the interaction between Brachypodium distachyon (Bd) and Serendipita indica (Si; syn. Piriformospora indica), at four (4) days post inoculation (DPI). mRNA sequencing reads of Si-colonized and non-colonized roots, as well as axenic fungal cultures w...
ORGANISM(S): Serendipita indica 
2021-07-15 | E-MTAB-10649 | biostudies-arrayexpress
TranscriptomicssRNA-seq of Brachypodium distachyon roots inoculated with Serendipita indica (syn. Piriformospora indica)
We sequenced mRNA and small RNA (sRNA) profiles in the interaction between Brachypodium distachyon (Bd) and Serendipita indica (Si; syn. Piriformospora indica), at four (4) days post inoculation (DPI). sRNA sequencing reads of Si-colonized and non-colonized roots, as well as axenic fungal cultures w...
ORGANISM(S): Serendipita indica 
2021-07-15 | E-MTAB-10650 | biostudies-arrayexpress
TranscriptomicsTranscriptional profiling of Piriformospora indica colonizing living and dead barley roots
Recent sequencing projects have provided deep insight into fungal lifestyle-associated genomic adaptations. Here we report on the 25 Mb genome of the mutualistic root symbiont Piriformospora indica (Sebacinales, Basidiomycota) and provide a global characterization of fungal transcriptional responses...
ORGANISM(S): Piriformospora indica 
2011-09-30 | E-GEOD-31266 | biostudies-arrayexpress
TranscriptomicsCharacterization of Nicotiana attenuata plants with reduced expression of HSPRO (ir-hspro plants).
Identification of transcripts that change expression in roots of Nicotiana attenuata plants with reduced expression of HSPRO and in association with Piriformospora indica. Gene expression in roots of Nicotiana attenuata wild type and ir-hspro seedlings was measured at 14 days after inoculation with ...
ORGANISM(S): Nicotiana attenuata 
2012-11-06 | E-GEOD-35086 | biostudies-arrayexpress
TranscriptomicsPiriformospora indica primes barley for systemic resistance against powdery mildew
Colonization of barley roots with the basidiomycete fungus Piriformospora indica enhances resistance against the leaf pathogen Blumeria graminis f.sp. hordei (Bgh). To identify genes involved in this mycorrhiza-induced systemic resistance, we used the Affymetrix Barley1 22K gene chip for leaf transc...
ORGANISM(S): Hordeum vulgare 
2011-10-06 | E-MEXP-3389 | biostudies-arrayexpress
GenomicsmRNA-seq of Brachypodium distachyon roots inoculated with Serendipita indica (syn. Piriformospora indica)
mRNA-seq of Brachypodium distachyon roots inoculated with Serendipita indica (syn. Piriformospora indica)
PRJEB45997 | ENA
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