Pla - OmicsDI

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Unknown (11644)
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Organisms

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Clostridium ljungdahlii DSM 13528 (3)
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Organisms

Homo sapiens (153)
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biofilm metagenome (8)
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human gut metagenome (7)
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Acinetobacter schindleri (5)
Candida albicans (5)
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human saliva metagenome (4)
Salmonella enterica subsp. enterica serovar Typhimurium (4)
Stenotrophomonas maltophilia (4)
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Rattus (3)
compost metagenome (3)
rat gut metagenome (3)
Proteus mirabilis (3)
Bacillus subtilis (3)
feces metagenome (3)
unidentified adenovirus (2)
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Ligilactobacillus acidipiscis (2)
Citrobacter (2)
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Enterobacter cloacae (2)
human metagenome (2)

Repository

ENA (752)
pride (68)
biostudies-arrayexpress (61)
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geo (26)
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Tissue

Blood (28)
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Disease

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Alzheimer's disease (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (115)
ESI (43)
Shotgun proteomics (32)
Bottom-up proteomics (14)
Data-dependent acquisition (12)
Mass spectrometry (8)
EI (7)
Gel-based experiment (7)
Affinity purification coupled with mass spectrometry proteomics (7)
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Unspecified (2)
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SWATH MS (1)
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SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - hilic (4)
Illumina NovaSeq 6000 (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina HiSeq 2500 (2)
NextSeq 500 (2)
LTQ Orbitrap XL (2)
454 GS 20 (1)
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Nuclear Magnetic Resonance (NMR) - (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2025 (32)
2022 (29)
2026 (22)
2023 (18)
2021 (12)
2018 (12)
2010 (11)
2020 (9)
2014 (9)
2024 (9)
2013 (8)
2012 (7)
2019 (5)
2015 (4)
2016 (3)
2009 (3)
2017 (2)
2011 (2)
2008 (2)
2007 (2)
2005 (1)

CHEBI ID

CHEBI:72959 (2)
CHEBI:28125 (2)
CHEBI:72999 (2)
CHEBI:73074 (2)
CHEBI:16977 (2)
CHEBI:17196 (2)
CHEBI:17115 (2)
CHEBI:16196 (2)
CHEBI:17750 (2)
CHEBI:16467 (2)
CHEBI:17203 (2)
CHEBI:18050 (2)
CHEBI:15971 (2)
CHEBI:17053 (2)
CHEBI:16015 (2)
CHEBI:16737 (2)
CHEBI:16919 (2)
CHEBI:16347 (2)
CHEBI:17490 (2)
CHEBI:15603 (2)
CHEBI:16643 (2)
CHEBI:17895 (2)
CHEBI:17295 (2)
CHEBI:15756 (2)
CHEBI:16828 (2)
CHEBI:17351 (2)
CHEBI:131581 (1)
CHEBI:131583 (1)
CHEBI:141595 (1)
CHEBI:141587 (1)

Metabolite Name

Creatinine (4)
PC(16:0/16:0) (3)
L-Alanine (3)
Uracil (3)
Thymine (3)
Thiamine (3)
L-Proline (3)
Serotonin (3)
Acetylcholine (3)
Indole (3)
N-Acetylneuraminic acid (3)
Cytosine (3)
Creatine (3)
L-Valine (3)
L-Tyrosine (3)
L-Phenylalanine (3)
Hypoxanthine (3)
.beta.-Homoproline (2)
Lys-Pro (2)
2-Amino-2-methyl-1,3-propanediol (2)
Agmatine (2)
N2-Acetyl-L-ornithine (2)
N6-Methyladenine (2)
Heptanoic acid (2)
Val-Thr (2)
Val-Lys (2)
Thioetheramide-PC (2)
Pro-Ala (2)
Ile-Ala (2)
Harmane (2)

First Public Date

2026 (137)
2025 (115)
2024 (114)
2023 (70)
2022 (68)
2021 (60)
2019 (50)
2020 (39)
2018 (25)
2016 (22)
2017 (21)
2013 (13)
2014 (12)
2015 (6)

Modelling Approach

Logical model (1)
Ordinary differential equation model (1)

Lab affiliation

Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC (7)
Chinese PLA General Hospital (2)
Clinical Chemistry, Department of Translational Medicine, Lund University, Skane University Hospital Malmö, 205 02 Malmö, Sweden. (2)
Department of Hepatobiliary Surgery, the First Affiliated Hospital(Southwest Hospital) of Army Military Medical University, Chongqing 400038, China. (1)
Div. Clinical Protein Science & Imaging Dept. of Clinical Sciences (Lund) and Dept. of Biomedical Engineering Lund University (1)
Div. Clinical Protein Science & Imaging Clinical Sciences & Biomedical Engineering Lund University Sweden (1)
Proteomics Unit, Chemistry Institute, Federal University of Rio de Janeiro, Rio de Janeiro - RJ, Brazil (1)
The Third Medical Center, Chinese PLA General Hospital (1)
Laboratory of Mass Spectrometry, MolSys Research Unit, University of Liège, 4000 Liège, Belgium (1)
Vall d'Hebron Institute of Oncology (VHIO), Barcelona, Spain (1)
INCLIVA Biomedical Research Institute (1)
College of Veterinary Medicine, Northwest A&F University, Yangling, Shaaxi 712100, P. R. (1)
Institute of Biochemistry and Molecular Biology I, University Clinics and Faculty of Medicine, Heinrich-Heine University Düsseldorf, Germany (1)
LMU - Gene Centre Feodor-Lynen-Straße 25 81377 München Germany (1)
Cell and Chemical Biology Leiden University Medical Center Leiden The Netherlands (1)
Clinical Protein Science & Imaging, Biomedical Center, Dept. of Biomedical Engineering, Lund University, Sweden. (1)
Vall d'Hebron Institute of Oncology (VHIO) (1)
Department of Molecular Science and Technology and College of Advanced Bio-convergence Engineering, Ajou University, Suwon 16499, Republic of Korea (1)
Proteomics and Metabolomics Unit, Basic Research Department, Children's Cancer Hospital 57357 Cairo, (CCHE-57357), Cairo 11562, Egypt. (1)
Neurovascular Research Laboratory, Vall d’Hebron Institute of Research (VHIR), Universitat Autònoma de Barcelona, Barcelona, Spain. Institute de Biomedicine of Seville, IBiS/Hospital Universitario Virgen del Rocío/CSIC/University of Seville & Department of Neurology, Hospital Universitario Virgen Macarena, Seville. (1)
Department of Pharmacology and Chemical Biology, State Key Laboratory of Oncogenes and Related Genes, Shanghai Universities Collaborative Innovation Center for Translational Medicine, Shanghai Jiao Tong University School of Medicine (1)
Department of Orthopedics, The Fourth Medical Centre, Chinese PLA General Hospital, Beijing, China National Clinical Research Center for Orthopedics, Sports Medicine & Rehabilitation, Beijing, China (1)
Principal investigator at Lund University (1)
Department of Surgery. Clincal Sciences Lund. Lund University (1)
Departamento de Biología Celular, Biología Funcional y Antropología Física,Instituto de Biotecnología y Biomedicina (1)
UK Dementia Research Institute, University of Cambridge, Clifford Albutt building, Cambridge biomedical campus, Cambridge, CB2 0AH, UK (1)
Head Proteomics Core Facility University of Cologne CECAD Research Center Joseph-Stelzmann-Str. 26 50931 Cologne (1)
Deputy head of department at Department of Translational Medicine. Lund University. Principal investigator at CEBMMS PI. Professor at Clinical Chemistry, Malmö Professor at Clinical Protein Science and Imaging Professor at Department of Clinical Sciences, Lund (1)
Professor at the Section for Clinical Chemistry, Department of Translational Medicine, Lund University. Sweden (1)
1. Institute of Physiology, University Clinics and Faculty of Medicine. University of Cologne, Germany 2. Center for Molecular Medicine (CMMC), University of Cologne. Germany 3. Institute of Biochemistry and Molecular Biology, University Clinics and Faculty of Medicine, Heinrich-Heine University Düsseldorf, Germany (1)

IsPrivate

False (2)

Model Flag

Non Kinetic (1)

Classification

bacteria (83)
fungi (10)
viruses (4)

Study type

Transcription profiling by array (41)
RNA-seq of coding RNA (11)
ChIP-seq (2)
Unknown experiment type (1)
Plant - High-throughput sequencing (1)
ChIP-chip by array (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (1715)
2025 (1706)
2023 (1445)
2021 (1332)
2024 (1329)
2020 (907)
2019 (554)
2018 (507)
2017 (451)
2016 (396)
2015 (336)
2026 (247)
2014 (242)
2013 (164)
2012 (122)
2011 (67)
2010 (61)
2009 (43)
2008 (31)
2007 (14)
2005 (13)
2003 (7)
2004 (6)
2006 (4)
2000 (2)
1998 (2)
2002 (1)
1999 (1)

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Pla2g7 regulates bone homeostasis via Alox12/12-HETE/Gpr31 signaling axis

Bone homeostasis mainly depends on the equilibrium of osteoclasts and osteoblasts, overactivated osteoclasts play a pivotal role in the progression of osteoporosis. Here, we revealed that Pla2g7 (phospholipase A2 group VII) was positively correlated with bone resorption in clinic. By single-cell ...

2025-10-30 | MTBLS13141 | MetaboLights

ATG9A-PLA2G6 axis reprograms phospholipid metabolism to drive metabolic liver disease and hepatocellular carcinoma

The liver orchestrates systemic metabolism, and its dysfunction drives diseases including metabolic dysfunction-associated steatotic liver disease (MASLD) and hepatocellular carcinoma (HCC). ATG9A, an autophagy-related transmembrane protein and lipid scramblase, regulates lipid dynamics, yet its ...

2025-10-24 | MTBLS12451 | MetaboLights

Flavobacterium sp. PLA-DH12 isolate:PLA-DH12

Flavobacterium sp. PLA-DH12 isolate:PLA-DH12 Genome sequencing

PRJNA1481818 | ENA

Flavobacterium sp. PLA-1-15

Flavobacterium sp. PLA-1-15 Genome sequencing

PRJNA1185913 | ENA

PLA-surfaces and control samples from PLA-degrading mesophilic composts

PLA-associated metagenomes from mesophilic composts with PLA degradability

PRJNA1185390 | ENA

Solicola agrisoli strain:PLA-1-18

Solicola agrisoli strain:PLA-1-18 Genome sequencing

PRJNA1185911 | ENA

Paucibacter sp. PLA-PC-4

Paucibacter sp. PLA-PC-4 Genome sequencing and assembly

PRJNA898972 | ENA

High content imaging in the screening of biomaterial-induced MSC behavior

Upon contact with a biomaterial, cells and surrounding tissues respond in a manner dictated by the physicochemical and mechanical properties of the material. Traditionally, cellular responses are monitored using invasive analytical methods that report the expression of genes or proteins. These analy...

ORGANISM(S): Homo sapiens

2018-11-10 | E-MTAB-7352 | biostudies-arrayexpress

Fermented fish (Pla-ra) from Northeast Thailand

PRJNA695512 | ENA

BV-2 cells treated with different nanoparticles

BV-2 cells treated with different nanoparticles,including rHDL,PEG-PLA NPs,QD,PEG-QD and AuNP.The cells were treated with NPs for 4h.

ORGANISM(S): Mus musculus (Mouse)

2023-10-01 | PXD044395 | Pride

Nanoparticles Microglia

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12684 Results

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