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MetabolomicsLinking root exudates to functional plant traits
Primary and secondary metabolites exuded by plant roots have mainly been studied under laboratory conditions, while knowledge of root exudate patterns of plants growing in natural communities is very limited. Focusing on ten common European grassland plant species, we asked to which degree exuded me...
2022-02-11 | MTBLS687 | MetaboLights
MetabolomicsRhizosphere Microecological Changes Associated with Etiolation of Fritillaria thunbergii Miq.: Impacts on Biomass and Active Components

Dried bulbs of Fritillaria thunbergii Miq. (Liliaceae family) are medicinal materials used to clear heat and resolve phlegm. However, premature plant etiolation during cultivation reduces yield and hampers the industrial development of these plants. This study compared agronomic traits, soil prop...

2026-01-19 | MTBLS13717 | MetaboLights
MetabolomicsA general non-self response as part of plant immunity
Plants, like other multicellular lifeforms, are colonized by microorganisms. How plants respond to their microbiota is currently not well understood. We used a phylogenetically diverse set of 39 endogenous bacterial strains from Arabidopsis thaliana leaves to assess host transcriptional and metaboli...
2021-09-13 | MTBLS2522 | MetaboLights
MetabolomicsOverexpression of vesicle-associated membrane protein PttVAP27-17 as a tool to improve biomass production and the overall saccharification yields in Populus trees

Background

Bioconversion of wood into bioproducts and biofuels is hindered by the recalcitrance of woody raw material to bioprocesses such as enzymatic saccharification. Targeted modification of the chemical composition of the feedstock can improve saccharification but this gain is often abr...
2021-10-06 | MTBLS628 | MetaboLights
MetabolomicsWhat CHO is made of: Variations in the biomass composition of Chinese hamster ovary cell lines

Background: Cell line specific, genome-scale metabolic models enable rigorous and systematic in silico investigation of cellular metabolism. Such models have recently become available for Chinese hamster ovary (CHO) too. However, a key ingredient, namely an experimentally validat...

2020-07-13 | MTBLS1210 | MetaboLights
MetabolomicsLC-MS based plant metabolic profiles of thirteen grassland species grown in diverse neighbourhoods
In plants, secondary metabolite profiles provide a unique opportunity to explore seasonal variation and responses to the environment. These include both abiotic and biotic factors. In field experiments, such stress factors occur in combination. This variation alters the plant metabolic profiles in y...
2020-12-23 | MTBLS679 | MetaboLights
TranscriptomicsUncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle
The common edible mushroom Agaricus bisporus is a basidiomycete that thrives on decaying plant material in the forests and grasslands of North America and Europe. It is adapted to forest litter and contributes to global carbon recycling, degrading cellulose, hemicellulose and lignin in plant biomass...
ORGANISM(S): Agaricus bisporus 
2015-09-23 | E-GEOD-65800 | biostudies-arrayexpress
MetabolomicsPlant species richness elicits changes in the metabolome of grassland species via soil biotic legacy
Species-rich plant communities can induce unique soil biotic legacy effects through changing the abundance and composition of soil biota. These soil legacy effects can cause feedbacks to influence plant performance. In addition, soil biota can induce (defensive) secondary metabolites in shoots ...
2019-05-30 | MTBLS544 | MetaboLights
MetabolomicsBiochemical changes in Robinia pseudoacacia leaflets in dependence of leaf mining, plant age and location

Plant responses to leaf-mining insects are still poorly studied, especially in woody species. Robinia pseudoacacia is widely cultivated in Ukraine, where it is not native. There, the trees are facing increasing damage from the likewise introduced leaf miner species Parectopa robiniel...

2026-03-20 | MTBLS14099 | MetaboLights
ProteomicsComparative proteomics of plant biomass degradation by the ascomycete fungus Podospora anserine
The project compares the production of plant biomass degrading enzymes by Podospora anserina during growth on different feed stocks.
ORGANISM(S): Podospora anserina 
2017-02-13 | PXD005170 | Pride
Induction Cellulase Pectinase Plant biomass degradation Xylanase Fungal enzymes 
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