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TranscriptomicsRNA-seq profiling of six fetal tissues at day 63 of gestation from a reciprocal backcross of German Landrace and Piétrain
Utilizing a reciprocal backcross design: F₁ (German Landrace × Pietrain) sows × GL or Pi sires (Ponsuksili et.al. 2025; doi:https://doi.org/10.1098/rsob.240285), we profiled six fetal tissues (liver, brain, muscle, kidney, ovary, and testis) at day 63 of gestation. Our study aimed to: (i) characteri...
ORGANISM(S): Sus scrofa 
2025-10-21 | E-MTAB-15588 | biostudies-arrayexpress
TranscriptomicsGene expression data from muscle sample of pig commercial herd Pix(DLxDE).
In this study, we used correlation analysis of the expression profiles and carcass traits to produce a list of functional candidate genes under the assumption that genes with strong correlation between their expression values and drip belong to pathways or networks relevant for the control of the tr...
ORGANISM(S): Sus scrofa 
2012-12-04 | E-GEOD-32112 | biostudies-arrayexpress
TranscriptomicsPre- and postnatal hepatic expression profiles of two pig breeds differing in body composition
In order to gain insight into hepatic metabolic pathways and key transcripts affecting traits related to body composition we aimed to compare samples of pigs of two breeds, the “obese” German Landrace (DL) and the “lean” Pietrain (Pi) obtained at prenatal stages (35, 63, and 91 days post con...
ORGANISM(S): Sus scrofa 
2010-06-30 | E-GEOD-5399 | biostudies-arrayexpress
TranscriptomicsFetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig [LP]
German landrace gilts were fed a low protein diet (LP, 6% CP) throughout their whole pregnancy. Subsequently muscle transcriptome profiles of the offspring were analysed at prenatal (94 dpc) and postnatal stages (1, 28, 188 dpn) per stage offspring of 3 gilts were collected for expression profiling
ORGANISM(S): Sus scrofa 
2012-09-05 | E-GEOD-33739 | biostudies-arrayexpress
TranscriptomicsFetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig [AP]
German landrace gilts were fed an adequate protein diet (AP, 12% CP) throughout their whole pregnancy. Subsequently muscle transcriptome profiles of the offspring were analysed at prenatal (94 dpc) and postnatal stages (1, 28, 188 dpn) per stage offspring of 3 gilts were collected for expression pro...
ORGANISM(S): Sus scrofa 
2012-09-05 | E-GEOD-33737 | biostudies-arrayexpress
TranscriptomicsFetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig [HP]
German landrace gilts were fed a high protein diet (HP, 30% CP) throughout their whole pregnancy. Subsequently muscle transcriptome profiles of the offspring were analysed at prenatal (94 dpc) and postnatal stages (1, 28, 188 dpn) per stage offspring of 3 gilts were collected for expression profilin...
ORGANISM(S): Sus scrofa 
2012-09-05 | E-GEOD-33738 | biostudies-arrayexpress
TranscriptomicsFetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig
This SuperSeries is composed of the following subset Series: GSE33737: Fetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig [AP] GSE33738: Fetal programming of muscle transcriptome in response to gestational dietary protein levels in the pig [HP] GSE...
ORGANISM(S): Sus scrofa 
2012-09-05 | E-GEOD-33740 | biostudies-arrayexpress
TranscriptomicsDNA methylation analysis of porcine mammary epithelial cells challenged with Escherichia coli
Epigenetic changes such as DNA methylations regulate gene expression patterns in response to environmental cues including infections. Microbial infections induced DNA methylation may play a potential role in modulating host-immune response. In the present study, we sought to determine DNA methylatio...
ORGANISM(S): Sus scrofa 
2019-07-17 | E-MTAB-7363 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiles (RRBS) of the muscle of pigs distinct in metabolic types and genetic background
DNA methylation is an epigenetic mechanism that plays roles in gene regulation and expression. This study aims to profile DNA methylation at genome-wide scale and single base resolution using reduced representation bisulfite sequencing (RRBS) of the muscle of pigs differing in muscle metabolism and ...
ORGANISM(S): Sus scrofa 
2024-12-01 | E-MTAB-7338 | biostudies-arrayexpress
TranscriptomicsDNA methylation profiling of the amygdala, hippocampus, hypothalamus and adrenal gland of the pig using Reduced Representation Bisulfite Sequencing (RRBS)
Three brain regions of the limbic system, the amygdala, hippocampus and hypothalamus, are responsible for survival behaviors such as feeding and physical challenging. Hypothalamus works together with pituitary and adrenal gland (HPA-axis) to adjust homeostatic state by modulating stress-response hor...
ORGANISM(S): Sus scrofa 
2024-11-19 | E-MTAB-10640 | biostudies-arrayexpress
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