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A post-processing algorithm for miRNA microarray data
Comprehensive posttranslational modifications in the testis-specific histone variant H3t protein validated in tagged knock-in mice.
ORGANISM(S): Mus Musculus (mouse) 
Histone post-translational modifications (PTMs) are epigenetic marks that operate within the central dogma of molecular biology: upon an environmental stimulus, the histone PTMs surrounding DNA can be changed in a way that modifies gene expression, and, therefore, the abundance and composition of RN...
ORGANISM(S): Oreochromis Mossambicus 
2024-12-10 | PXD042718 | panorama
Elucidating the regulatory elements for transcription termination and post-transcriptional processing in the Streptomyces clavuligerus genome
Histone post-translational modifications (hPTMs) generate a complex combinatorial code that has been implicated with various pathologies, including cancer. Dissecting such a code in physiological and diseased states may be exploited for epigenetic biomarker discovery, but hPTM analysis in clinical s...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2016-08-25 | MSV000080100 | MassIVE
Cells were lysed with TFA, and precipitated with cold acetone. The precipitates were transferred to E3filters and digestion was performed overnight with trypsin. The peptides were desalted with StageTips, and were analyzed on Eclipse Orbitrap with DIA mode. For MS1, the resolution was set to 120,00...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2024-02-27 | MSV000094179 | MassIVE
The most abundant proteins in pulse seed, including chickpea (Cicer arietinum L.), are the 7S globulins (vicilins) and 11S globulins (legumins), which play key roles in plant reproduction and human nutrition and are also recognized as potential allergens. During seed maturation, legumins and vicilin...
ORGANISM(S): Cicer arietinum (Chickpea) (Garbanzo) 
2026-06-01 | PXD078377 | Pride
See paper: Postnovo: Post-Processing Improves the Accuracy of De Novo Peptide Sequences
ORGANISM(S): Synechococcus Sp. Wh 7803 (ncbitaxon:32051) Desulfovibrio Vulgaris Str. Hildenborough (ncbitaxon:882) Escherichia Coli K-12 (ncbitaxon:83333) Rhodopseudomonas Palustris Tie-1 (ncbitaxon:395960) 
2018-04-10 | MSV000082266 | MassIVE
One of the main disadvantages of using DNA microarrays for miRNA expression profiling is inability of adequate comparison of expression values across different miRNAs. This leads to a large amount of miRNAs with high scores which are actually not expressed in examined samples, i.e. false positives. ...
ORGANISM(S): synthetic construct Homo sapiens 
2019-10-04 | GSE138411 | GEO
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