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ProteomicsDevelopment of Spectral library using mass spectrometry-based Data-Independent Acquisition protocol for Mycobacterium tuberculosis proteome
The PRIDE ID's used for building the spectral library are PXD001188, PXD004161, PXD006039, PXD006117, PXD008555, PXD009549, respectively. The spectral library was created using the Bibliospec tool (version 1.0) with the .msf files generated from the total proteome search. The output files (.blib) we...
ORGANISM(S): Mycobacterium Tuberculosis H37rv (ncbitaxon:83332) 
2021-10-27 | MSV000088270 | MassIVE
ProteomicsNeuroproteomics with Systems Biology: The proteomic landscape of adult human hypothalamus
The hypothalamus is an anatomically small, but functionally crucial region of the human brain. Normal hypothalamus functioning is central to the regulation of neuroendocrine and neurovegetative systems as well as modulation of chronobiology and behavioral aspects of the human body. Till date the hum...
ORGANISM(S): Homo sapiens (Human) 
2021-11-01 | PXD026879 | Pride
Hypothalamus Autophagy Proteomics Proteogenomics Post translational modifications Neuropeptides. Human brain Adult neurogenesis Orbitrap fusion 
ProteomicsLC-MS/MS data of Tinospora cordifolia
Tinospora cordifolia has been used for thousands of years to treat various health conditions, including neurodegenerative diseases. The study aimed to elucidate the mechanism of action and protein targets of T. cordifolia in the context of Alzheimers disease through untargeted metabolomics and netwo...
ORGANISM(S): Tinospora Cordifolia (ncbitaxon:285590) 
2024-11-04 | MSV000096283 | MassIVE
ProteomicsMetabolomics analysis highlights Yashtimadhu (Glycyrrhiza glabra L.) mediated neuroprotection in a rotenone-induced cellular model of Parkinsons disease
In the present study we carried out global and targeted metabolomics of differentiated IMR32 cells to study the neuroprotective mechanism of Yashtimadhu (Glycyrrhiza glabra L.) in rotenone induced cellular model of parkinsons disease. Our mass spectrometry data highlighted 2403 and 2934 aligned met...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-08-31 | MSV000088036 | MassIVE
ProteomicsHematopoietic stem cell derived conditioned media metabolomics
Metabolomic data of conditioned media derived from culturing hematopoietic stem cells.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-02-14 | MSV000097113 | MassIVE
MetabolomicsGNPS - Metabolomics analysis highlights Yashtimadhu (Glycyrrhiza glabra L.) mediated neuroprotection in a rotenone-induced cellular model of Parkinsons disease
In the present study we carried out global and targeted metabolomics of differentiated IMR32 cells to study the neuroprotective mechanism of Yashtimadhu (Glycyrrhiza glabra L.) in rotenone induced cellular model of parkinsons disease. Our mass spectrometry data highlighted 2403 and 2934 aligned met...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-08-31 | MSV000088036 | GNPS
MetabolomicsGNPS Global LC-MS/MS based metabolomic profiling of Triphala
Triphala is a herbal formulation widely used in Ayurveda as a rejuvenation and revitalization therapy. Its constitutes include a mixture of dried extracts from Phyllanthus emblica, Terminalia chebula, and Terminalia bellirica. In this study, we employed an LC-MS/MS based strategy for global profilin...
ORGANISM(S): Terminalia Chebula (ncbitaxon:155022) Terminalia Bellirica (ncbitaxon:155021) Phyllanthus Emblica (ncbitaxon:296036) 
2021-01-31 | MSV000086784 | GNPS
MetabolomicsGNPS - Hematopoietic stem cell derived conditioned media metabolomics
Metabolomic data of conditioned media derived from culturing hematopoietic stem cells.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2025-02-14 | MSV000097113 | GNPS
ProteomicsDevelopment of a potential salivary biomarker panel for Oral Squamous Cell Carcinoma using a proteomics-based approach.
Oral Squamous Cell Carcinoma (OSCC) is one of the most prevalent cancers in the world with the maximum number of cases reported from India. Poor survival rate associated with OSCC can be attributed to the non-availability of a biomarker, as one of the major reasons, leading to late presentation. Ide...
ORGANISM(S): Homo Sapiens 
2021-07-09 | PXD020263 | panorama
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