Pre-analytical variables

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Organisms

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Human alphaherpesvirus 1 strain 17 (21)
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Liquid Chromatography MS - negative - hilic (1)

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2019 (1)

CHEBI ID

CHEBI:28300 (4)
CHEBI:28044 (4)
CHEBI:15428 (4)
CHEBI:16449 (4)
CHEBI:17368 (4)
CHEBI:26271 (3)
CHEBI:17126 (3)
CHEBI:27570 (3)
CHEBI:30751 (3)
CHEBI:15366 (3)
CHEBI:78320 (3)
CHEBI:16737 (3)
CHEBI:16919 (3)
CHEBI:17382 (2)
CHEBI:84304 (2)
CHEBI:64681 (2)
CHEBI:18186 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:17234 (2)
CHEBI:15347 (2)
CHEBI:9300 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:10072 (2)
CHEBI:27266 (2)
CHEBI:48131 (2)
CHEBI:16704 (2)
CHEBI:16135 (2)
CHEBI:15891 (2)

Metabolite Name

Phenylalanine (3)
Thymidine (3)
Hypoxanthine (3)
Spirolide C (2)
2-Hydroxy-6-oxo-(2'-aminophenyl)-hexa-2,4-dienoate (2)
P-Coumaric acid (2)
2-Hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate (2)
N-Palmitoyl Serine (2)
Chlorogenic acid (2)
Sulfolithocholylglycine (2)
N2,N2-Dimethylguanosine (2)
Chenodeoxycholic acid (2)
Lactic acid (2)
Hyodeoxycholic acid (2)
Proline (2)
Formate (2)
Phenylalanine (2)
Glucose (2)
Glutamine (2)
Acetate (2)
Alanine (2)
Lactate (2)
Valine (2)
Isoleucine (2)
Glycine (2)
Phthalic acid (2)
Panthenol (2)
Ricinoleic acid (2)
Trans-EKODE-(E)-Ib (2)
Benzoic acid (2)

First Public Date

2018 (8)
2014 (2)
2026 (1)
2025 (1)
2024 (1)
2023 (1)
2020 (1)
2017 (1)

Study type

Transcription profiling by array (10)
RNA-seq of non coding RNA (3)
RNA-seq of coding RNA (2)
MicroRNA profiling by array (1)

Release Date

2023 (20)
2022 (19)
2021 (16)
2025 (16)
2019 (11)
2020 (10)
2024 (9)
2017 (5)
2010 (4)
2015 (4)
2018 (3)
2012 (2)
2008 (2)
2026 (2)
2016 (1)
2013 (1)
2011 (1)
2014 (1)
2009 (1)
2006 (1)

Lab affiliation

Animal Medicine Department, University of Extremadura, 10003 Cáceres, Spain (1)
Biomedical Center Munich Molecular Biology Großhaderner Strasse 9 82152 Planegg-Martinsried Phone: (089) 2180 71602 (1)
Biomedical Sciences , Iowa State University (1)
Dairy Science & Technology, Food Quality & Design group, Wageningen University & Research, Wageningen, The Netherlands (1)
Department of Biochemistry and Microbiology, University of Chemistry and Technology, Prague (1)
Department of Bioresources, Medical Genome Center, National Center of Neurology and Psychiatry (1)
Department of Neurology,Neurosciences Centre,All India Institute of Medical Sciences,Ansari Nagar, New Delhi-110029, India (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry (1)
Laboratory of Experimental Cancer Research, Department of Human Structure and Repair, Ghent University, Ghent, Belgium (1)
Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil. (1)
Lund University (1)
MDC Berlin (1)
Molecular Oncology Moffitt Cancer Center Tampa, FL, USA (1)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands (1)
PRISM laboratory, Inserm U1192, University of Lille (1)
Section for Translational Surgical Oncology and Biobanking, Department of Surgery, University of Lübeck and University Hospital Schleswig-Holstein, Campus Lübeck (1)
UMR7338, Developmental and stem cell biology, Pasteur Institut, FRANCE (1)
University of Vienna, Faculty of Chemistry, Joint Metabolome Facility, Department of Analytical Chemistry (1)
Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198, Gif-sur-Yvette, France (1)
Vice Director, Professor Novo Nordisk Foundation Center for Protein Research Proteomics Program University of Copenhagen Faculty of Health and Medical Sciences Blegdamsvej 3b DK-2200 Copenhagen Denmark (1)

Tags

xref:PubMed:20025722 (2)
xref:PubMed:32034172 (1)
xref:PubMed:35433768 (1)
xref:PubMed:41160668 (1)
xref:PubMed:39426568 (1)

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Biospecimen Pre-analytical Variables (BPV)

PRJNA932917 | ENA

Biospecimen Pre-analytical Variables (BPV)

PRJNA376469 | ENA

Analysis of gliomas DNA methylation: Assessment of pre-analytical variables

PRJNA1167815 | ENA

Analysis of gliomas DNA methylation: Assessment of pre-analytical variables

MeDIP-Seq for assessment of the effect of pre-analytical variables on DNA methylation

ORGANISM(S): Homo sapiens

2024-10-07 | GSE278575 | GEO

NCI Biospecimen Pre-analytical Variables (BPV) Analysis

The Biospecimen Pre-analytical Variables (BPV) Program is a National Cancer Institute-sponsored study to systematically assess the effects of pre-analytical factors on the molecular profile of biospecimens. A robust biospecimen collection infrastructure was established to prospectively collect bi...

phs001304 | dbGaP

Pre-analytical Sample Quality Determines Performance of Plasma Proteomics Workflows for Biomarker Discovery

This dataset contains mass spectrometry-based proteomic analyses of human plasma samples processed through five distinct proteomics workflows: neat plasma, perchloric acid precipitation with neutralization (PCA-N), and three bead-based enrichment methods (SAX magnetic beads, Sera Sil 700 magnetic be...

ORGANISM(S): Homo sapiens (Human)

2025-08-21 | PXD063572 | Pride

Production and application of recombinant extracellular vesicles for method development, data normalization and assessment of pre-analytical variables

The diagnostic and therapeutic use of extracellular vesicles (EV) is under intense investigation and may lead to societal benefits. Reference materials are an invaluable resource for developing, improving and assessing the performance of regulated EV applications and for quantitative and objective d...

ORGANISM(S): Homo sapiens (Human)

2023-03-13 | PXD017542 | Pride

Recombinant Urine Extracellular vesicles Human Plasma

Pre-analytical Sample Quality Determines Performance of Plasma Proteomics Workflows for Biomarker Discovery part02

ORGANISM(S): Homo sapiens (Human)

2025-08-21 | PXD063593 | Pride

Pre-analytical variables Lc-ms Plasma proteomics Bead-based enrichment Cellular contamination Sample quality

The effect of preanalytical factors on cerebrospinal fluid and plasma proteomics

This dataset contains SOMAscan proteomic data obtained from human cerebrospinal fluid (CSF) and plasma samples to evaluate the impact of pre-analytical variables (PAVs) on proteomic stability. The study systematically assessed common processing factors such as storage temperature, time-to-processing...

ORGANISM(S): Homo sapiens (Human)

2026-09-07 | PAD000011 | Pride

Cerebrospinal fluid (csf) Somascan Pre-analytical variables (pavs) Biobanking

Optimization of extraction method for circulating tumor DNA measurements by digital droplet PCR

A study of pre-analytical variables and optimization of extraction method for circulating tumor DNA measurements by digital droplet PCR

PRJEB30048 | ENA

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189 Results

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