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TranscriptomicsGlobal changes in the nuclear positioning of chromatin domains and genomic interactions that orchestrate B cell fate
The genome is folded into domains that are located in either transcriptionally inert or permissive compartments. Here we used genome-wide strategies to characterize domains during B cell development. Structured Interaction Matrix Analysis revealed that CTCF occupancy was primarily associated with i...
ORGANISM(S): Mus musculus 
2012-10-09 | E-GEOD-40173 | biostudies-arrayexpress
ProteomicsMetal-induced Protein Precipitation in E. coli
Using a range of copper we have utilized Metal-induced Protein Precipitaiton (MiPP) technique to elucidate the copper midpoints of the proteins found in an E. coli proteome. Using bottem-up proteomics techniques and TMT-10 plex isobaric mass-tags we were able to use MiPP to classify proteins based o...
ORGANISM(S): Escherichia coli 
2023-01-03 | PXD035711 | Pride
Precipitiation Sprox Cpp Metal E. coli Copper 
GenomicsDrosophila melanogaster
Tis11 mediated mRNA degradation regulates intestinal stem cell quiescence in Drosophila melanogaster
PRJNA381000 | ENA
TranscriptomicsMethylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island methylation detection
This SuperSeries is composed of the following subset Series: GSE15746: Methylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island methylation detection 1 GSE15747: Methylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island m...
ORGANISM(S): Homo sapiens 
2010-05-19 | E-GEOD-15801 | biostudies-arrayexpress
TranscriptomicsMethylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island methylation detection 2
Methylation of CpG islands associated with genes can affect the expression of the proximal gene, and methylation of non associated CpG islands correlates to genomic instability. This epigenetic modification has been shown to be important in many pathologies, from development and disease to cancer. W...
ORGANISM(S): Homo sapiens 
2010-05-19 | E-GEOD-15747 | biostudies-arrayexpress
TranscriptomicsMethylation detection Oligonucleotide Microarray Analysis: high resolution method for CpG island methylation detection 1
Methylation of CpG islands associated with genes can affect the expression of the proximal gene, and methylation of non associated CpG islands correlates to genomic instability. This epigenetic modification has been shown to be important in many pathologies, from development and disease to cancer. W...
ORGANISM(S): Homo sapiens 
2009-04-28 | E-GEOD-15746 | biostudies-arrayexpress
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