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MetabolomicsIntegrated Proteomic and Metabolomic Profiling Reveals Potential Virulence Factors and Secondary Metabolites in the Secretome of Fusarium verticillioides

Fusarium verticillioides (F. verticillioides) is an important fungal pathogen known to infect a variety of economically critical crops, especially maize, causing substantial yield reductions and economic losses worldwide. In addition to its direct damage to agricultural productivity, F. verticill...

2025-11-12 | MTBLS13312 | MetaboLights
MetabolomicsSequential lipidomic, metabolomic, and proteomic analyses of serum, liver, and heart tissue specimens from peroxisomal biogenesis factor 11α knockout mice
Peroxisomes are versatile single membrane-enclosed cytoplasmic organelles, involved in reactive oxygen species (ROS) and lipid metabolism and diverse other metabolic processes. Peroxisomal disorders result from mutations in Pex genes-encoded proteins named peroxins (PEX proteins) and single peroxiso...
2022-02-02 | MTBLS1887 | MetaboLights
TranscriptomicsDeep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human Embryonic Stem cells (part 2)
Recent RNA-sequencing studies have shown remarkable complexity in the mammalian transcriptome. The ultimate impact of this complexity on the predicted proteomic output is less well defined. We have undertaken a strand-specific RNA sequencing of multiple cellular RNA fractions (>18Gb) to uncover the ...
ORGANISM(S): Homo sapiens 
2011-07-01 | E-GEOD-25842 | biostudies-arrayexpress
ProteomicsProteomic sequencing of Akkermansia muciniphila (Akk) and Akkermansia muciniphila-derived extracellular vesicles (Akk-EVs)
We conducted comparative proteomic sequencing of Akkermansia muciniphila (Akk) and its extracellular vesicles (Akk-EVs) to identify functional protein components within Akk-EVs responsible for alleviating disease progression
ORGANISM(S): Trypanosoma brucei Akkermansia muciniphila 
2026-06-08 | PXD062069 | Pride
Akk-evs Akkermansia muciniphila Proteomic sequencing 
TranscriptomicsRNA-seq analysis of acute Rb1 deletion in adult mouse tissues
Abstract:The pRb tumor suppressor protein associates with chromatin and regulates gene expression. Numerous studies have identified Rb-dependent RNA signatures, but the proteomic effects of Rb-loss are largely unexplored. We have acutely ablated Rb in adult mice and conducted quantitative analysis o...
ORGANISM(S): Mus musculus 
2015-09-11 | E-GEOD-71924 | biostudies-arrayexpress
TranscriptomicsObjective molecular criteria for oocyte quality and developmental potential: a proteomic study in inbred mice
Current understanding of oocyte quality and developmental potential maintains that stochastic or epigenetic processes modulate the action of determinants that are laid in the oocyte during oogenesis. These determinants are considered to be rather conserved across mice, leading different strains of m...
ORGANISM(S): Mus musculus 
2016-06-18 | E-MTAB-5013 | biostudies-arrayexpress
TranscriptomicsTranscriptome changes in soybean seeds resulting from RNAi suppression of seed storage proteins
We report the changes in transcriptome that results from RNAi suppression of 7S and 11S storage protein synthesis in soybean seeds, Proteomic results show that other proteins compensate for the storage protein shortfall. The transcriptome analysis show numerous changes result from suppressing storag...
ORGANISM(S): Glycine max 
2010-05-01 | E-GEOD-21116 | biostudies-arrayexpress
TranscriptomicsProteomic and transcriptomic responses to thiamethoxam in the Sweetpotato whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae)
We investigated the transcriptional response to thiamethoxam in the Bemisia tabaci using Illumina sequencing technology. A total of 1,338 genes were differently expressed in the thiamethoxam-resistant whiteflies. All the B biotype whiteflies were maintained on cabbage. The susceptible strain (TH-S)...
ORGANISM(S): Bemisia tabaci 
2013-07-15 | E-GEOD-42102 | biostudies-arrayexpress
GenomicsEpigenomic, transcriptomic and proteomic characterizations of reference samples
Epigenomic, transcriptomic and proteomic characterizations of reference samples
PRJNA1117883 | ENA
UnknownEpigenomic, transcriptomic, and proteomic characterization of breast cancer cell line reference samples.
Not available
S-EPMC12853167 | biostudies-literature
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