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MetabolomicsHigh-Precision Automated Workflow for Urinary Untargeted Metabolomic Epidemiology
Urine is a non-invasive biofluid that is rich in polar metabolites and well-suited for metabolomic epidemiology. However, due to individual variability in health and hydration status, the physiological concentration of urine can differ >15-fold, which can pose major challenges in untargeted LC-MS me...
2021-06-10 | MTBLS2295 | MetaboLights
MetabolomicsProMetIS, deep phenotyping of mouse models by combined proteomics and metabolomics analysis

Genes are pleiotropic and getting a better knowledge of their function requires a comprehensive characterization of their mutants. Here, we generated multi-level data combining phenomic, proteomic and metabolomic acquisitions from plasma and liver tissues of two C57BL/6 N mouse models lacking the...

2021-09-01 | MTBLS1903 | MetaboLights
MetabolomicsCustomized Consensus Spectral Library Building for Untargeted Quantitative Metabolomics Analysis with Data Independent Acquisition Mass Spectrometry and MetaboDIA Workflow
Data independent acquisition-mass spectrometry (DIA-MS) coupled with liquid chromatography is a promising approach for rapid, automatic sampling of MS/MS data in untargeted metabolomics. However, wide isolation windows in DIA-MS generate MS/MS spectra containing a mixed population of fragment ions t...
2018-03-26 | MTBLS417 | MetaboLights
MetabolomicsProteomics and tracer metabolomics link GAPDH ISGylation to glycolytic control

Ubiquitin-like protein ISG15 (interferon-stimulated gene 15) has been implicated in the regulation of central carbon metabolism, but conflicting findings across experimental systems have limited mechanistic insight. Here, we applied a multi-omics approach in cells ectopically expressing the ISGyl...

2026-03-02 | MTBLS12619 | MetaboLights
UnknownA Bioconductor workflow for processing and analysing spatial proteomics data.
Not available
S-EPMC6053703 | biostudies-literature
UnknownA Bioconductor workflow for processing, evaluating, and interpreting expression proteomics data.
Not available
S-EPMC10683783 | biostudies-literature
UnknownA Simplified Perchloric Acid Workflow With Neutralization (PCA N) for Democratizing Deep Plasma Proteomics at Population Scale.
Not available
S-EPMC12597270 | biostudies-literature
UnknownToward an Optimized Workflow for Middle-Down Proteomics.
Not available
S-EPMC5362747 | biostudies-literature
UnknownInteractive Web Tool for Standardizing Proteomics Workflow for Liquid Chromatography-Mass Spectrometry Data.
Not available
S-EPMC7059686 | biostudies-literature
UnknownAn Ultrasensitive Spatial Tissue Proteomics Workflow Exceeding 100 Proteomes Per Day.
Not available
S-EPMC12828817 | biostudies-literature
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