Proximity-dependent labeling

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1 Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 2 Department of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, NC 27710, USA 3 Duke Cancer Institute, Duke University School of Medicine, Durham, NC 27710, USA 4 Department of Pathology, Duke University School of Medicine, Durham, NC 27710, USA (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 3Biological and Biomedical Sciences Program, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 5Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA 8Department of Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA (1)
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photoactivation-dependent proximity labeling (PDPL) MS

we report a photoactivation-dependent proximity labeling (PDPL) method designed by genetically attaching photosensitizer protein miniSOG to a protein of interest (POI). Triggered by blue light, singlet oxygen is generated, enabling temporally-resolved chemical probe labeling.

ORGANISM(S): Homo Sapiens

2022-06-22 | PXD034811 |

Proximity-dependent labeling identifies dendritic cells that prime the antitumor CD4+ T cell response

PRJNA1151000 | ENA

Directed evolution improves the catalytic efficiency of APEX2-mediated proximity-dependent RNA labeling

PRJNA1090511 | ENA

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

Not available

S-EPMC9392063 | biostudies-literature

Proximity-dependent biotin labeling in testicular germ cells identified TESMIN-associated proteins.

Not available

S-EPMC9789103 | biostudies-literature

IRS1 proximity-dependent biotin labeling

Data contains LC-MS results of proximity-dependent biotin labeling to generate the protein interaction network of IRS1 protein fused with Flag-miniTurbo (N-terminal tag) and expressed in T-REx HEK293 cells.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

MSV000088166 | MassIVE

Mapping p38α mitogen-activated protein kinase signaling by proximity-dependent labeling.

Not available

S-EPMC7184780 | biostudies-literature

Cell type-specific proximity labeling of organ secretomes reveals energy balance-dependent proteomic remodeling.

Intercellular communication is critical for maintaining organismal metabolic homeostasis. Here, we present a new method enabling temporally controlled, cell type-specific labeling of secreted and membrane proteins in key metabolic tissues. The method employs a genetically encoded proximity-labeling ...

ORGANISM(S): Mus musculus (Mouse)

2026-05-13 | PXD075539 | Pride

Cell type-specific proximity labeling of organ secretomes reveals energy balance-dependent proteomic remodeling.

Not available

S-EPMC12871138 | biostudies-literature

Cell-type and subcellular compartment-specific APEX2 proximity labeling reveals activity-dependent nuclear proteome dynamics in the striatum

The vertebrate brain consists of diverse neuronal types, classified by distinct anatomy and function, along with divergent transcriptomes and proteomes. Defining the cell-type specific neuroproteome is important for understanding the development and functional organization of neural circuits. This t...

ORGANISM(S): Mus musculus (Mouse)

2021-07-10 | PXD022335 | Pride

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