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This experiment uses iCLIP to identify the binding pattern of the spliceosomal protein PRPF8 on RNA. The data shows that PRPF8 binds strongly and specifically in the region 12 to 14nt upstream of 5' splice sites (5ss). Due to PRPF8's role in the formation of the catalytically active spliceosome, thi...
ORGANISM(S): Homo sapiens 
The carboxy-terminus of the spliceosomal protein PRPF8, which regulates the RNA helicase Brr2, is a hotspot for mutations causing retinitis pigmentosa-type 13, with unclear role in human splicing and tissue-specificity mechanism. We used patient induced pluripotent stem cells-derived cells, carrying...
ORGANISM(S): Homo sapiens (Human) 
2024-03-01 | PXD043645 | Pride
RNA-sequencing experiments performed on control siRNA treated and PRPF8 depleted cells
ORGANISM(S): Homo sapiens 
PRPF8 iCLIP on HeLa cells in response to eIF4A3 Knockdown
The autosomal-dominant Y2334N mutation in PRPF8 is associated with retinitis pigmentosa, a progressive retinal disorder. Here, we investigated how the Y2334N mutation affects circRNA differential expression in the retinas of homozygous Y2334N mutant mice.
ORGANISM(S): Mus musculus 
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