Pulsed light - OmicsDI

Show results for

Unknown (562)
Transcriptomics (289)
Proteomics (125)
Genomics (70)
Metabolomics (8)
Other (1)
Multiomics (1)

Organisms

Homo sapiens (118)
Mus musculus (64)
Schizosaccharomyces pombe (29)
Drosophila melanogaster (24)
Caenorhabditis elegans (19)
Carassius auratus (14)
Rattus norvegicus (11)
Pseudomonas putida (8)
Arabidopsis thaliana (5)
Trypanosoma brucei (4)
Xanthomonas oryzae pv. oryzae PXO99A (3)
Salmonella enterica (3)
Ovis aries (3)
Gallus gallus (3)
Danio rerio (3)
Mycobacterium tuberculosis (2)
Triticum aestivum (2)
Cloeon dipterum (1)
Pinus taeda (1)
Lactococcus lactis subsp. lactis (1)
Mustela putorius furo (1)
Mytilus galloprovincialis (1)
Callithrix jacchus (1)
Leishmania major (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Spodoptera frugiperda (1)
Macaca mulatta (1)
Listeria monocytogenes EGD-e (1)
Rhizobium leguminosarum (1)
Schistosoma mansoni (1)

Organisms

Mus musculus (5)
Trichoderma atroviride IMI 206040 (1)
Nannochloropsis oceanica (1)
Neurospora crassa (1)
Vibrio parahaemolyticus (1)
Cucumis melo (1)
Drosophila melanogaster (1)
Rattus norvegicus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (293)
pride (71)
EGA (44)
MassIVE (34)
ENA (20)
jPOST (13)
geo (8)
MetaboLights (8)
iProX (4)
GPMDB (1)

Tissue

Cell culture (23)
Epithelial cell (10)
Permanent cell line cell (6)
Blood cell (4)
Fibroblast (4)
Brain (3)
Colon (3)
B cell (2)
Blood (2)
Blood plasma (2)
Cell suspension culture (2)
Diploid cell (2)
HeLa cell (2)
Kidney (2)
Skin (2)
Whole body (2)
Cardiac gastric gland (1)
Cartilage (1)
Cartilage tissue (1)
Cervix epithelium (1)
Colon epithelial cell (1)
Early embryonic cell (1)
Embryonic stem cell (1)
Epithelial cell of cervix (1)
Fruit (1)
Heart (1)
JURKAT cell (1)
Leukocyte (1)
Liver (1)
T cell (1)

Disease

Normal (6)
Cervix carcinoma (6)
Breast cancer (4)
Colon cancer (3)
Not infected (2)
Androgen-dependent prostate cancer (1)
Unspecified peripheral T-cell lymphoma (1)
T. circumcincta infection (1)
Active Crohn's disease (1)
Hodgkin lymphoma, mixed cellularity, stage IV (1)
Infected (1)
Infected with Drechmeria coniospora (1)
Mock infected (1)
Type 1 Diabetes Mellitus (1)
E. coli infected control (1)
B. pseudomallei infected (1)
Y. pestis infected (1)
Mastitis (1)
Chronic lymphocytic leukemia (1)
Chicken Anaemia Virus infected (1)
Colorectal adenocarcinoma (1)
None (1)
Not Available (1)
Acute leukemia (1)
Amyotrophic lateral sclerosis (1)
Brain glioblastoma multiforme (1)
Chronic myeloid leukemia (1)
Disease free (1)
Esophageal carcinoma (1)
Factor VIII deficiency (1)

Technology Type

Mass Spectrometry (71)
Shotgun proteomics (44)
Affinity purification coupled with mass spectrometry proteomics (9)
Mass spectrometry (8)
Bottom-up proteomics (7)
Data-dependent acquisition (7)
SWATH MS (6)
Gel-based experiment (5)
Data-independent acquisition (2)
Illumina HiSeq 2500, ILLUMINA (1)
NMR spectroscopy (1)
Immunopeptidomics (1)
Proteogenomics (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Axon GenePix 4000B scanning hardware (11)
ScanArray 4000XL [PerkinElmer] (8)
Illumina HiSeq 4000 (7)
ScanArray 5000 [PerkinElmer] (5)
Illumina HiSeq 2500 (5)
G2565BA DNA microarray scanner [Agilent] (4)
Illumina NovaSeq 6000 (4)
PALM Robo LCM (3)
NextSeq 2000 (3)
Illumina HiSeq 2000 (3)
NextSeq 500 (3)
ScanArray Lite [PerkinElmer] (2)
ScanArray Express HT [PerkinElmer] (2)
Scanning hardware (2)
NEXTflex Small-RNA Seq kit v3 (Perkin Elmer) & NEXTflex Rapid XP DNA-seq kit v2 (Perkin Elmer) (1)
Direct-zol RNA microprep kit (Zymo Research), LabChip RNA pico sensitivity assay, Perkin Elmer & Nucleospin RNA kit (Macherey Nagel) (1)
PALM type 4 microscope (Zeiss) (1)
Affymetrix miRNA 3.1 (1)
Not Applicable (1)
Not Applicablre (1)
Microarray scanner system (1)
HP desktop (1)
Fluidics workstation (1)
Axon Instruments GenePix 4000B scanner (1)
Agilent (1)
Agilent Scanner (1)
PC (1)
Affymetrix 428 (1)
Covaris E220evolution (1)
ScanArray 4000 [PerkinElmer] (1)

Publication Date

2010 (68)
2011 (32)
2008 (32)
2025 (27)
2013 (27)
2007 (27)
2022 (24)
2024 (21)
2020 (19)
2021 (18)
2012 (18)
2016 (17)
2015 (17)
2009 (17)
2026 (13)
2023 (13)
2019 (8)
2014 (8)
2017 (8)
2018 (7)
2006 (5)
2005 (3)

CHEBI ID

CHEBI:61993 (2)
CHEBI:32365 (2)
CHEBI:17992 (2)
CHEBI:30805 (2)
CHEBI:17822 (2)
CHEBI:26271 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:30746 (2)
CHEBI:17242 (2)
CHEBI:17859 (2)
CHEBI:32805 (2)
CHEBI:16995 (2)
CHEBI:42111 (2)
CHEBI:28822 (2)
CHEBI:6650 (2)
CHEBI:28842 (2)
CHEBI:16196 (2)
CHEBI:16865 (2)
CHEBI:30832 (2)
CHEBI:15741 (2)
CHEBI:15428 (2)
CHEBI:18012 (2)
CHEBI:16449 (2)
CHEBI:30915 (2)
CHEBI:15940 (2)
CHEBI:17351 (2)
CHEBI:30769 (2)
CHEBI:72770 (1)
CHEBI:149654 (1)

Metabolite Name

Leucine (2)
Lactic acid (2)
Oxalic acid (2)
Glycine (2)
Nicotinic acid (2)
Dehydroascorbic acid (2)
2-Oxoglutaric acid (2)
Cis-Aconitic acid (2)
Citric acid (2)
Succinic acid (2)
Fumaric acid (2)
Serine (2)
Alanine (2)
Proline (2)
Maltotriose (2)
Isoleucine (2)
Glutaric acid (2)
Adipic acid (2)
2-b-D-glucopyranosyloxy-4,7-dimethoxy-1,4-benzoxazin-3-one (HDMBOA glucoside) (1)
2-b-D-glucopyranosyloxy-4-hydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA glucoside) (1)
Tert-Leucine (1)
Stearic acid (C18_0) (1)
Pentadecanoic acid (C15_0) (1)
Palmitoleic acid (C16_1n-7c) (1)
Palmitelaidic acid (C16_1n-9c) (1)
Oleic acid (C18_1n-9c) (1)
Nonadecanoic acid (C19_0) (1)
N-(Carboxymethyl)-L-alanine (1)
Myristoleic acid (C14_1n-5c) (1)
Myristic acid (C14_0) (1)

First Public Date

2026 (4)
2022 (4)
2025 (2)
2024 (2)
2021 (2)
2020 (2)
2014 (2)
2017 (1)
2015 (1)

Classification

bacteria (1)

Modification

4x(15)N labeled L-arginine (3)
2x(15)N labeled L-lysine (2)
4 (1)

Study type

Transcription profiling by array (192)
Unknown experiment type (16)
RNA-seq of coding RNA (14)
Transcription profiling by tiling array (12)
Comparative genomic hybridization by array (7)
RNA-seq of coding RNA from single cells (6)
ChIP-chip by array (5)
Other (5)
ChIP-seq (4)
Methylation profiling by array (4)
Translation profiling (2)
Animal - High-throughput sequencing (2)
RNAi profiling by array (2)
MicroRNA profiling by array (2)
RNA-seq of non coding RNA (2)
Transcription profiling by SAGE (1)
MNase-seq (1)
RIP-chip by array (1)
ChIP-chip by tiling array (1)
Plant - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Genotyping by array (1)
Antigen profiling (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)
Bisulfite-seq (1)
Proteomic profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (89)
2010 (72)
2022 (69)
2021 (68)
2024 (62)
2023 (59)
2020 (44)
2019 (38)
2011 (38)
2018 (36)
2008 (34)
2015 (32)
2016 (31)
2017 (31)
2007 (30)
2013 (28)
2012 (28)
2014 (22)
2009 (20)
2026 (14)
2006 (6)
2005 (3)
2004 (1)

Lab affiliation

Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and Signalling Research Centres BIOSS and CIBSS, University of Freiburg, 79104 Freiburg im Breisgau, Germany (3)
Yale University School of Medicine (2)
CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (1)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (1)
Cancer Science Institute of Singapore, National University of Singapore, Singapore (1)
Cancer Sciences Unit, Faculty of Medicine, University of Southampton, Southampton, UK (1)
Center for Integrative Genomics, University of Lausanne, Switzerland (1)
Center for Physiology and Pathophysiology, Institute of Vegetative Physiology, University of Köln, Köln, Germany Cologne Excellence Cluster on Cellular Stress Responses in Aging-associated Diseases (CECAD), University of Cologne, Cologne, Germany (lab head) (1)
Centre for Cancer Cell & Molecular Biology Barts Cancer Institute Queen Mary University of London Charterhouse Square London EC1M 6BQ The United Kingdom. (1)
Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, Charterhouse square, London EC1M 6BQ, The United Kingdom. (1)
Centre for Craniofacial and Regenerative Biology, King's College London, Guy's Hospital, United Kingdom (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich (TUM), Freising, Germany (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Germany (1)
College of Food Science, Shenyang Agricultural University (1)
DKFZ Heidelberg (1)
Department of Agricultural, Livestock and Environmental Biotechnology, School of Agriculture and Veterinary Sciences, São Paulo State University, Jaboticabal, Brazil. (1)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology and BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104 Freiburg im Breisgau, Germany (1)
Department of Biochemistry and Functional Proteomics, Institute of Biology II, Faculty of Biology, University of Freiburg, 79104 Freiburg im Breisgau, Germany (1)
Department of Biological Sciences, University of Bergen, Bergen, Norway (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Zurich, Switzerland (1)
Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States (1)
Department of Genome Sciences University of Washington 3720 15th Ave NE Seattle WA 98195 (USA) (1)
Department of Genome Sciences, University of Washington, Seattle, WA, USA (1)
Department of Laboratory Medicine, Wiita Lab, University of California, San Francisco, USA (1)
Department of Pediatrics, Dr. von Hauner Children’s Hospital and Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany (1)
Department of human molecular genetics and biochemistry, Sackler faculty of medicine, Tel Aviv University, Israel. (1)
Functional Proteomics Lab, Faculty of Biology, University of Freiburg, Germany (1)
Genome Biology Unit and Proteomics Core Facility, European Molecular Biology Laboratory, 69117 Heidelberg, Germany (1)
German Cancer Research Center (DKFZ) University Clinic Heidelberg (1)
German Cancer Research Center Heidelberg University Clinic Heidelberg (1)

Previous page
1 / 106
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 106
Next page

Sort by:

Relevance

Page size

Wheat growth, applied water use efficiency and flag leaf metabolome under continuous and pulsed deficit irrigation

The intensity and frequency of precipitation events are predicted to change over the coming decades. For many areas, longer periods without rainfall are expected. We investigated the importance of irrigation frequency under water deficit conditions for growth, physiology and chemistry of wheat (<...

2020-09-23 | MTBLS1821 | MetaboLights

Proteomic Analysis of Pulsed Light-Treated Tomatoes

Lycopene content significantly increased in pulsed light-treated tomatoes. Proteomic analysis identified 1046 differentially expressed proteins (DEPs). Multi-omics analyses revealed that the gene expression, protein accumulation, and metabolite levels in the carotenoid biosynthesis pathway of tomato...

ORGANISM(S): Solanum lycopersicum

2026-01-05 | PXD070355 | Pride

Protrusion vs Cell-body pulsed-SILAC proteomics

In mesenchymal-like cell migration, cells need to polarise into a protrusive front and a retracting cell body. Apart from proteins, several mRNAs are known to be localised to cell protrusions but to what extent RNA localisation and local translation contributes toward front-back assymetry is unknown...

ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human)

2015-10-09 | PXD002649 | Pride

Pulsed-silac local translation protrusion

Expression analysis of circadian light response in Drosophila

Light is a strong environmental cue that resets the circadian clock rhythm. We have used Affymetrix microarrays to profile the Drosophila head transcriptome response following a brief light pulse during the early night. Comparison of control (un-pulsed) and experimental flies reveal large number of...

ORGANISM(S): Drosophila melanogaster

2014-07-23 | E-GEOD-39578 | biostudies-arrayexpress

Comparative proteomic analysis of Aspergillus brasiliensis conidia with and without pulsed-light exposure.

Shotgun proteomics was carried out to assess the impact of a high-fluence pulse-light treatment on Aspergillus brasiliensis conidia delivered with a laboratory xenon system (Claranor).

ORGANISM(S): Aspergillus brasiliensis CBS 101740

2026-07-11 | PXD072221 | Pride

Decontamination Conidia Proteomics Oxydative stress Inactivation Molecular alterations Oxydation Spores Fungi

Stress Response of Pseudomonas aeruginosa Under Pulsed Light Stress

PRJNA1462158 | ENA

pulsed light irradiated Vibrio parahaemolyticus

PRJNA593659 | ENA

Omics Analysis of Postharvest Tomatoes Treated with Pulsed Light

PRJNA1354624 | ENA

Enhanced Algal Photosynthetic Photon Efficiency by Pulsed Light.

Not available

S-EPMC7235644 | biostudies-literature

Quantitative proteomics reveals energy metabolism remodeling in Bacillus cereus spores under pulsed light treatment

ORGANISM(S): Bacillus Cereus Atcc 14579

2026-03-09 | PXD075424 |

Previous page
1 / 106
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 106
Next page

Sort by:

Relevance

Page size

1058 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Classification

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets