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Unknown
(6463)
Proteomics
(296)
Transcriptomics
(80)
Metabolomics
(53)
Genomics
(11)
Multiomics
(3)
Organisms
Homo sapiens
(119)
Mus musculus
(36)
Rattus norvegicus
(5)
Saccharomyces cerevisiae
(4)
Schizosaccharomyces pombe
(3)
Arabidopsis thaliana
(3)
Staphylococcus aureus
(3)
Escherichia coli
(3)
Gallus gallus
(3)
Harpegnathos saltator
(2)
Candida albicans
(2)
Bos taurus
(2)
Oreochromis niloticus
(1)
Brassica carinata x Brassica rapa
(1)
Epinephelus tauvina
(1)
Streptomyces avermitilis
(1)
Brassica oleracea
(1)
Camponotus floridanus
(1)
Oryza longistaminata
(1)
Leptospira interrogans serovar Lai str. 56601
(1)
Cucumis sativus
(1)
Gossypium hirsutum
(1)
Oryza sativa Indica Group
(1)
Listeria monocytogenes
(1)
Zea mays
(1)
Oryza sativa
(1)
Vitis vinifera
(1)
Nicotiana tabacum
(1)
Oryza sativa Japonica Group
(1)
Triticum aestivum
(1)
Organisms
Homo sapiens
(1)
Repository
pride
(153)
iProX
(119)
biostudies-arrayexpress
(84)
MetaboLights
(53)
MassIVE
(14)
EGA
(5)
PanoramaPublic
(4)
PeptideAtlas
(4)
geo
(1)
jPOST
(1)
PAXDB
(1)
ENA
(1)
Tissue
Cell culture
(36)
Epithelial cell
(16)
Plant cell
(10)
Brain
(7)
Leaf
(7)
Whole body
(6)
Root
(5)
Blood plasma
(4)
Embryonic stem cell
(4)
Permanent cell line cell
(4)
Others
(3)
Blood
(3)
Fibroblast
(3)
HeLa cell
(3)
Hepatocyte
(3)
Liver
(3)
Shoot
(3)
Blood serum
(2)
Embryo
(2)
Pancreas
(2)
Retina
(2)
Skeletal muscle
(2)
Skin
(2)
Stem cell
(2)
Testis
(2)
Accessory sex gland
(1)
Escherichia coli metabolite
(1)
HEK-293 cell
(1)
JURKAT cell
(1)
PK-15 cell
(1)
Disease
Disease free
(12)
Breast cancer
(5)
Cardiovascular system disease
(2)
Type 2 diabetes mellitus
(2)
Prostate cancer
(1)
Acute leukemia
(1)
Adult hepatocellular carcinoma
(1)
Cancer
(1)
Chronic obstructive pulmonary disease
(1)
Colon cancer
(1)
Endometrial Endometrioid Adenocarcinoma
(1)
Esophagus squamous cell carcinoma
(1)
Hepatocellular carcinoma
(1)
Medulloblastoma
(1)
Mixed disorder as reaction to stress
(1)
Pancreatic ductal adenocarcinoma
(1)
Stomach cancer
(1)
Technology Type
Mass Spectrometry
(153)
Shotgun proteomics
(84)
Mass spectrometry
(41)
Bottom-up proteomics
(32)
Affinity purification coupled with mass spectrometry proteomics
(15)
Gel-based experiment
(13)
Data-dependent acquisition
(12)
Mass spectrometry assay
(11)
Top-down proteomics
(8)
SWATH MS
(3)
Immunopeptidomics
(2)
Illumina HiSeq 2500, ILLUMINA
(1)
NMR spectroscopy
(1)
Affinity proteomics
(1)
Data-independent acquisition
(1)
MSE
(1)
Mass spectrometry imaging
(1)
Proteogenomics
(1)
Instrument Platform
Liquid Chromatography MS - positive - reverse phase
(17)
Liquid Chromatography MS - negative - reverse phase
(15)
Q Exactive
(6)
Orbitrap Exploris 480
(5)
Liquid Chromatography MS - negative
(5)
Liquid Chromatography MS - positive - reverse-phase
(5)
Liquid Chromatography MS - negative - reverse-phase
(5)
Liquid Chromatography MS - positive
(4)
Liquid Chromatography MS - negative - hilic
(4)
Liquid Chromatography MS - positive - hilic
(4)
LTQ Orbitrap Elite
(3)
Orbitrap Fusion Lumos
(2)
Thermo Scientific LTQ FT Ultra
(2)
Liquid Chromatography MS - Negative (LC-MS (Negative))
(2)
Liquid Chromatography MS - Positive (LC-MS (Positive))
(2)
Gas Chromatography MS -
(2)
6540 Q-TOF LC/MS (Agilent)
(2)
Axon Instruments GenePix 4000B scanner
(1)
NextSeq 500
(1)
LTQ Orbitrap
(1)
Orbitrap Eclipse
(1)
Orbitrap Elite mass spectrometer(Thermo)
(1)
Orbitrap Fusion
(1)
Q Exactive HF
(1)
Liquid Chromatography Tandem MS (LC-MS/MS (Negative))
(1)
Liquid Chromatography Tandem MS (LC-MS/MS (Positive))
(1)
Liquid Chromatography MS - negative – rp
(1)
Liquid Chromatography MS - positive – rp
(1)
Liquid Chromatography MS - alternating - reverse phase - Exactive (Thermo Scientific)
(1)
Liquid Chromatography MS negative reverse phase
(1)
Publication Date
2022
(51)
2026
(38)
2024
(37)
2025
(33)
2023
(31)
2021
(28)
2020
(17)
2010
(16)
2014
(15)
2016
(14)
2015
(14)
2019
(14)
2013
(11)
2018
(10)
2017
(9)
2011
(8)
2012
(6)
2008
(3)
2009
(2)
2005
(2)
2003
(2)
2007
(1)
2006
(1)
2004
(1)
UNIPROT ID/AC
2A5D_YEAST
(1)
2AAA_YEAST
(1)
3HAO_YEAST
(1)
4932.YDL191W
(1)
4932.YDR025W
(1)
4932.YEL054C
(1)
4932.YER102W
(1)
4932.YER117W
(1)
4932.YER137C-A
(1)
4932.YER159C-A
(1)
4932.YGR161C-C
(1)
4932.YGR161W-A
(1)
4932.YGR161W-B
(1)
4932.YIL018W
(1)
4932.YIL069C
(1)
4932.YJR145C
(1)
4932.YKR059W
(1)
4932.YKR094C
(1)
4932.YLR035C-A
(1)
4932.YLR157C-A
(1)
4932.YLR227W-A
(1)
4932.YML026C
(1)
4932.YML040W
(1)
4932.YMR051C
(1)
4932.YOL120C
(1)
4932.YOR133W
(1)
4932.YOR182C
(1)
4932.YOR312C
(1)
4932.YPL220W
(1)
4932.YPL257W-A
(1)
ENSEMBL ID
ENSG00000147251
(3)
ENSG00000170477
(3)
ENSG00000247315
(3)
CHEBI ID
CHEBI:7916
(14)
CHEBI:27897
(14)
CHEBI:16811
(13)
CHEBI:6650
(13)
CHEBI:16704
(13)
CHEBI:15741
(13)
CHEBI:30769
(13)
CHEBI:18237
(12)
CHEBI:17154
(12)
CHEBI:16335
(12)
CHEBI:26271
(12)
CHEBI:16708
(12)
CHEBI:16919
(12)
CHEBI:15354
(12)
CHEBI:17368
(12)
CHEBI:16865
(11)
CHEBI:28044
(11)
CHEBI:18211
(11)
CHEBI:18257
(11)
CHEBI:15891
(11)
CHEBI:37024
(11)
CHEBI:17015
(11)
CHEBI:28842
(11)
CHEBI:17568
(11)
CHEBI:17533
(11)
CHEBI:16750
(11)
CHEBI:17596
(11)
CHEBI:16870
(10)
CHEBI:16467
(10)
CHEBI:25017
(10)
Metabolite Name
Uridine
(13)
Guanosine
(10)
Adenine
(9)
L-Tyrosine
(9)
L-Phenylalanine
(9)
Pantothenic acid
(8)
Taurine
(8)
Adenosine
(8)
L-Histidine
(8)
Xanthosine
(8)
Thymidine
(8)
Inosine
(8)
Citrulline
(7)
L-Threonine
(7)
Citric acid
(7)
Sebacic acid
(7)
Malic acid
(7)
Stearic acid
(7)
Suberic acid
(7)
L-Glutamine
(7)
L-Serine
(7)
Xanthine
(7)
Creatine
(7)
Hypoxanthine
(7)
Xanthurenic acid
(6)
Phenylacetaldehyde
(6)
L-Arginine
(6)
Succinic acid
(6)
Fumaric acid
(6)
Taurocholic acid
(6)
First Public Date
2022
(1)
Modification
N6
(1)
Not available
(1)
Study type
Transcription profiling by array
(46)
RNA-seq of coding RNA
(17)
RNA-seq of non coding RNA
(7)
ChIP-seq
(5)
Unknown experiment type
(4)
Comparative genomic hybridization by array
(3)
Other
(1)
MicroRNA profiling by array
(1)
Release Date
2025
(1023)
2022
(963)
2023
(837)
2024
(833)
2021
(718)
2020
(484)
2019
(336)
2018
(256)
2016
(216)
2017
(216)
2015
(149)
2026
(137)
2014
(125)
2013
(82)
2012
(44)
2010
(41)
2011
(30)
2009
(22)
2007
(13)
2008
(9)
2006
(4)
2005
(4)
2004
(3)
2002
(1)
2001
(1)
Lab affiliation
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China
(4)
Cornell University
(4)
Section of Infection and Immunity, Herman Ostrow School of Dentistry, University of Southern California
(4)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China
(3)
Cancer Center and Research Institute of Intestinal Diseases, Shanghai Tenth People's Hospital, School of Medicine, Tongji University
(2)
College of Chemistry and Chemical Engineering, Hubei University, Wuhan, 430062, Hubei, P. R. China.
(2)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China.
(2)
Department of Cardiology, Jiangbin Hospital of Guangxi Zhuang Autonomous Region, No. 85 Hedi Road, Nanning, Guangxi, 530021, China
(2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University
(2)
Mayo Clinic, Department of Oncology
(2)
Shandong University
(2)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM)
(2)
Shanghai Tenth People's Hospital, Tongji University School of Medicine
(2)
Sun Yat-sen University
(2)
USDA-ARS
(2)
University of Southern California
(2)
West China Second University Hospital, Sichuan University
(2)
Zhejiang University
(2)
1)Chongqing Medical University;2) Chongqing Key Laboratory of Translational Research for Cancer Metastasis and Individualized Treatment, Chongqing University Cancer Hospital
(1)
1. Fisheries College, Key Laboratory of Healthy Mariculture for the East China Sea, Ministry of Agriculture, Jimei University, Xiamen, Fujian, 361021, PR China
(1)
1Peking-Tsinghua Center for Life Sciences, Peking University, Beijing 100871, China 2Academy of Advanced Interdisciplinary Studies, Peking University, Beijing 100871, China 3Synthetic and Functional Biomolecules Center, Beijing National Laboratory for Molecular Sciences, Key Laboratory of Bioorganic Chemistry and Molecular Engineering of Ministry of Education, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China
(1)
Affiliated Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology
(1)
Beijing Key Laboratory of DNA Damage Response and College of Life Sciences, Capital Normal University, Beijing 100048, China
(1)
Beijing University of Agriculture, Beijing, China
(1)
Bio-X Institutes, Key Laboratory for the Genetics of Development and Neuropsychiatric Disorders (Ministry of Education), Shanghai Key Laboratory of Psychotic Disorders, and Brain Science and Technology Research Center, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, China.
(1)
Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, 200030, China (lab head)
(1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands
(1)
CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology, Beijing, China
(1)
CAS Key Laboratory of Separation Sciences for Analytical Chemistry, National Chromatographic R&A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS), Dalian 116023, China
(1)
CECAD Research Center, University of Cologne, Joseph-Stelzmann-Str. 26, 50931 Cologne, Germany
(1)
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Comparing the antidiabetic effects and chemical profiles of raw and fermented Chinese Ge-Gen-Qin-Lian decoction by integrating untargeted metabolomics and targeted analysis.
Not available
S-EPMC6204051
|
biostudies-literature
Cite
Proteome of Scutellaria baicalensis Georgi
Proteome of Scutellaria baicalensis Georgi from multiple tissues
ORGANISM(S):
Scutellaria Baicalensis
PXD041602
|
Cite
Qin-Qiao-Xiao-Du formula alleviate influenza virus infectious pneumonia through regulation gut microbiota and metabolomics.
Not available
S-EPMC9614278
|
biostudies-literature
Cite
Huang Qin decoction increases SLC6A4 expression and blocks the NFκB-mediated NLRP3/Caspase1/GSDMD pathway to disrupt colitis-associated carcinogenesis.
Not available
S-EPMC10927794
|
biostudies-literature
Cite
Network pharmacology analysis reveals neuroprotective effects of the Qin-Zhi-Zhu-Dan Formula in Alzheimer's disease.
Not available
S-EPMC9632440
|
biostudies-literature
Cite
Integrating Network Pharmacology and Metabolomics to Elucidate the Mechanism of Action of Huang Qin Decoction for Treament of Diabetic Liver Injury.
Not available
S-EPMC9176298
|
biostudies-literature
Cite
Qin Huang formula enhances the effect of Adriamycin in B-cell lymphoma via increasing tumor infiltrating lymphocytes by targeting toll-like receptor signaling pathway.
Not available
S-EPMC9272877
|
biostudies-literature
Cite
Melatonin confers saline-alkali tolerance by relieving nitrosative damage and S-nitrosylation of plasma membrane H+-ATPase 2 in tomato
Soil salination and alkalization are global problems impairing plant survival by disrupting REDOX homeostasis. Whether melatonin regulates REDOX homeostasis at nitrosative level, and thus affects plant saline-alkali tolerance remains unknown. In saline-alkali stress, excess nitric oxide (NO) causes ...
ORGANISM(S):
'Solanum lycopersicum' phytoplasma
2025-04-28
|
PXD056815
|
Pride
Melatonin
nitric oxide
plasma membrane h+-atpase 2
saline-alkali stress
s-nitrosylation
tomato
Cite
Metabonomic Study on the Plasma of High-Fat Diet-Induced Dyslipidemia Rats Treated with Ge Gen Qin Lian Decoction by Ultrahigh-Performance Liquid Chromatography-Mass Spectrometry.
Not available
S-EPMC8203394
|
biostudies-literature
Cite
Geochemical and Statistical Analyses of Trace Elements in Lake Sediments from Qaidam Basin, Qinghai-Tibet Plateau: Distribution Characteristics and Source Apportionment.
Not available
S-EPMC8872242
|
biostudies-literature
Cite
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