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ProteomicsHigh-quality and robust protein quantification in large clinical cohort of serum samples with IonStar
Robust, reliable quantification of large sample cohorts is often essential for meaningful clinical or pharmaceutical proteomics investigations, but it is technically challenging. When analyzing very large numbers of samples, isotope labeling approaches may suffer from substantial batch effects; and...
ORGANISM(S): Homo sapiens (Human) 
2023-10-12 | PXD036822 | Pride
Large-cohort clinical study  quantitative proteomics  ionstar  liquid chromatography-mass spectrometry  high-resolution mass spectrometry 
ProteomicsInteractome analysis of RESC6 and RESC8 from Trypanosoma brucei
Trypanosoma brucei requires extensive uridine insertion and deletion RNA editing of most of their mitochondrial transcripts to generate translatable open reading frames. The RNA editing substrate binding complex (RESC) serves as the scaffold that coordinates the protein-protein and protein-RNA inter...
ORGANISM(S): Trypanosoma brucei 
2023-10-12 | PXD046097 | Pride
Trypanosoma brucei Turboid Interactome 
UnknownFree-space creation of ultralong anti-diffracting beam with multiple energy oscillations adjusted using optical pen.
Not available
S-EPMC6262014 | biostudies-literature
TranscriptomicsCells Comprising the Prostate Cancer Microenvironment Lack Recurrent Clonal Somatic Genomic Aberrations
Prostate cancer-associated stroma (CAS) plays an active role in malignant transformation, tumor progression, and metastasis. Molecular analyses of CAS have demonstrated significant changes in gene expression; however, conflicting evidence exists on whether genomic alterations in benign cells compris...
ORGANISM(S): Homo sapiens 
2016-02-12 | E-GEOD-76456 | biostudies-arrayexpress
ProteomicsLC-MS/MS identification of BMAL1 interaction proteins
Advances in circadian research revealed an intricate relationship between aging and circadian rhythms. However, whether and how the circadian machinery contribute to stem cell aging, especially in primates, remains poorly understood. In this study, we investigated the role of BMAL1, the only non-red...
ORGANISM(S): Homo sapiens (Human) 
2022-03-18 | PXD030570 | Pride
Bmal1 aging 
ProteomicsLC-MS/MS identification of XPO7-interacting proteins
Identification XPO7-interating proteins by ectopically expressed FLAG-tagged XPO7 proteins in HEK293T cells and performed coimmunoprecipitation (co-IP) with FLAG antibody followed by mass spectrometry analysis.
ORGANISM(S): Homo Sapiens 
2022-11-03 | PXD037890 |
ProteomicsProteins interacting with GBP5 and RSV-SH protein
HEK293T were transfected with RSV-SH-HA, GBP5-HA or VR1012(empty vector) respectively for 48 h and then harvested. Co-IP assay were performed with HA beads (Roche, catalog no. 11867423001), the elution was analyzed by mass spectrum. Mass spectrum analysis were performed by the national center for pr...
ORGANISM(S): Homo Sapiens 
PXD054621 |
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