Ralser M M - OmicsDI

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Ordinary differential equation model (1)

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Lab affiliation

Charité Universitätsmedizin, Department of Biochemistry, 10117 Berlin, Germany The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, UK Max Planck Institute for Molecular Genetics, Berlin, Germany (4)
Markus Ralser, Prof. Dr. Einstein Professor of Biochemistry Head, Institute of Biochemistry, Charité University Medicine, Berlin markus.ralser@charite.de Senior Group Leader, The Francis Crick Institute, London markus.ralser@crick.ac.uk (3)
Charité - Universitätsmedizin Berlin Research group Biochemistry and Systems Biology of the Metabolism Institute of Biochemistry Germany (2)
Charité Universitätsmedizin Berlin, Institute of Biochemistry (2)
Charité – Universitätsmedizin Berlin, Department of Biochemistry, 10117 Berlin, Germany; The Francis Crick Institute, Molecular Biology of Metabolism Laboratory, London NW11AT, UK (2)
DZNE Munich, Neuroproteomics, Feodor-Lynen-Str. 17, 81377 München, Germany (2)
Department of Biochemistry, Charité Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health, Berlin, Germany Berlin Institute of Health (BIH) at Charité Universitätsmedizin Berlin, Berlin, Germany The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Roosevelt Dr, Headington, Oxford OX3 7BN, UK (2)
Department of Biochemistry, Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, Berlin Institute of Health, Berlin, Germany (2)
MRC Toxicology Unit, University of Cambridge (2)
1)Department of Biochemistry, Charité – Universitätsmedizin Berlin, Berlin, Germany. 2)The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, UK 3)Max Planck Institute for Molecular Genetics, Berlin, Germany (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, 3584 CH, Utrecht, The Netherlands and Netherlands Proteomics Center, Padualaan 8, 3584 CH, Utrecht, The Netherlands (1)
Cambridge Centre for Proteomics, Cambridge Systems Biology Centre, Department of Biochemistry, University of Cambridge, Cambridge CB2 1QR, U.K. (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QR UK (1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, U.K. (1)
Center for Regenerative Therapies TU Dresden (CRTD), Technische Universität Dresden, Fetscherstraße 105, 01307, Dresden, Germany (1)
Centre for Children's Health Research (CCHR) Queensland University of Technology 62 Graham Street South Brisbane, QLD 4101 AUSTRALIA (1)
Charite universitymedicine berlin (1)
Charite – Universitaetsmedizin Berlin (1)
Charite- Universitaetsmedizin Berlin, 10117 Berlin, Germany (1)
Charité Universitaetsmedizin (1)
Charité Universitätsmedizin Berlin (1)
Charité Universitätsmedizin Berlin, Department of Biochemistry, 10117 Berlin, Germany The Francis Crick Institute, Molecular Biology of Metabolism Laboratory, London NW1 1AT, UK The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, UK Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany (1)
Charité Universitätsmedizin Berlin, Department of Biochemistry, Berlin, Germany (1)
Charité Universitätsmedizin Berlin, Germany (1)
Charité Universitätsmedizin – Chariteplatz 1, 10117 Berlin (1)
Charité – Universitätsmedizin Berlin (1)
Charité – Universitätsmedizin Berlin (Insitute for Biochemistry) (1)
Charité – Universitätsmedizin Berlin, Department of Biochemistry, 10117 Berlin, Germany (1)
Circadian Clock Project, Tokyo Metropolitan Institute of Medical Science, Kamikitazawa 2-1-6, Setagaya-ku, Tokyo, 156-8506, Japan. (1)
Core Facility - High-Throughput Mass Spectrometry, Charité -Universitätsmedizin Berlin, corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin and Berlin Institute of Health (BIH), Berlin, Germany (1)

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Proteomes of gastrointestinal tract organoids

Examination of differential susceptibility of the gastric, small intestine and colon epithelium to SARS-CoV-2 infection Data used in the manuscript "SARS-CoV-2 tropism to intestinal but not gastric epithelial cells is defined by limited ACE2 expression" (Pauzuolis M, Fatykhova D, Zühlke B, Schwecke ...

ORGANISM(S): Homo sapiens (Human)

2024-03-20 | PXD044789 | Pride

Ralser2007_Carbohydrate_Rerouting_ROS

This is the model with unfitted parameters described in the article Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress Markus Ralser, Mirjam M Wamelink, Axel Kowald, Birgit Gerisch, Gino Heeren, Eduard A Struys, Edda Kl...

2024-09-02 | BIOMD0000000247 | BioModels

A general non-self response as part of plant immunity

Plants, like other multicellular lifeforms, are colonized by microorganisms. How plants respond to their microbiota is currently not well understood. We used a phylogenetically diverse set of 39 endogenous bacterial strains from Arabidopsis thaliana leaves to assess host transcriptional and metaboli...

2021-09-13 | MTBLS2522 | MetaboLights

Sequencing and genotypic analysis of the triosephosphate isomerase (TPI1) locus in a large sample of long-lived Germans.

Not available

S-EPMC2424074 | biostudies-literature

A catabolic block does not sufficiently explain how 2-deoxy-D-glucose inhibits cell growth.

Not available

S-EPMC2584745 | biostudies-literature

ALSPAC human inflammation plasma proteomics

The project aimed at investigating the impact of chronic low grade inflammation on plasma functions and plasma proteomes in healthy individuals.

ORGANISM(S): Homo sapiens (Human)

2022-11-26 | PXD037682 | Pride

Proteomics Avon longitudinal study of parents and children – alspac Inflammation Human Plasma

Plasma proteomics in mouse sepsis

Analysis of plasma proteomes from 8 week old C57BL/6J WT or TCRα-/- (Tcratm1Phi) either naïve or infected by intravenous injection of 5x105 yeast (clinical isolate SC5314), and collected 72 hrs post-infection

ORGANISM(S): Mus musculus (Mouse)

2022-11-26 | PXD037676 | Pride

Mice plasma proteomics sepsis

Dynamic rerouting of the carbohydrate flux is key to counteracting oxidative stress.

Not available

S-EPMC2373902 | biostudies-literature

The yeast osmostress response is carbon source dependent

Adaptation to altered osmotic conditions is a fundamental property of living cells and has been studied in particular detail in the yeast Saccharomyces cerevisiae. Yeast cells accumulate glycerol as compatible solute, controlled at different levels by the High Osmolarity Glycerol (HOG) response path...

ORGANISM(S): Saccharomyces cerevisiae

2017-02-27 | E-MTAB-5313 | biostudies-arrayexpress

Human sepsis with plasma samples

The project examines the mechanisms of neutrophil dysfunction during sepsis. Our work uncovered the central role of cell free circulating histones in eliminating mature neutrophil in favour of immature cells and characterized the mechanisms that regulate their release following systemic infection. M...

ORGANISM(S): Homo sapiens (Human)

2022-07-01 | PXD034391 | Pride

Human plasma sepsis

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