Reprograming - OmicsDI

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Unknown (528)
Genomics (455)
Transcriptomics (259)
Proteomics (40)
Methylation profiling (12)
Other (12)
Metabolomics (3)

Organisms

Mus musculus (151)
Homo sapiens (130)
Arabidopsis thaliana (21)
Danio rerio (8)
Drosophila melanogaster (7)
Rattus norvegicus (6)
Medicago truncatula (5)
Saccharomyces cerevisiae (5)
Ciona robusta (4)
Caenorhabditis elegans (3)
Pseudomonas chlororaphis subsp. aureofaciens 30-84 (2)
Vitis vinifera (2)
Sus scrofa (2)
Escherichia coli O157:H7 str. EDL933 (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Oryza sativa (2)
Morchella eximia (1)
Haberlea rhodopensis (1)
Enterobacter sp. SA187 (1)
Dendrobium catenatum (1)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)
Escherichia coli O157:H7 str. Sakai (1)
Allium sativum (1)
other sequences (1)
Monodelphis domestica (1)
Escherichia coli CFT073 (1)
Oryzias latipes (1)
Oryctolagus cuniculus (1)
Escherichia coli (1)
Gallus gallus (1)

Organisms

Mus musculus (135)
Homo sapiens (111)
Arabidopsis thaliana (22)
Drosophila melanogaster (7)
Danio rerio (7)
Medicago truncatula (4)
Ciona robusta (4)
Saccharomyces cerevisiae (4)
Rattus norvegicus (4)
Vitis vinifera (2)
Oryzias latipes (2)
Oryza sativa (2)
Caenorhabditis elegans (2)
human gut metagenome (2)
Haberlea rhodopensis (1)
Pseudomonas chlororaphis subsp. aureofaciens 30-84 (1)
Escherichia coli O157:H7 str. EDL933 (1)
Colletotrichum (1)
Brassica rapa subsp. nipposinica (1)
Monodelphis domestica (1)
Allium sativum (1)
Picea glauca (1)
Morchella eximia (1)
Dendrobium catenatum (1)
Enterobacter sp. SA187 (1)
Mytilus galloprovincialis (1)
Anser (1)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (1)
Macaca mulatta (1)
Escherichia coli str. K-12 substr. MG1655 (1)

Repository

ENA (385)
geo (330)
pride (34)
biostudies-arrayexpress (22)
iProX (2)
MassIVE (2)
GNPS (1)
GPMDB (1)
MetaboLights (1)
MetabolomicsWorkbench (1)
PanoramaPublic (1)
PeptideAtlas (1)

Tissue

Cell culture (4)
Liver (3)
Fibroblast (2)
Spleen (2)
Heart (1)
Bone marrow (1)
Cell suspension culture (1)
Granulosa cell (1)
Heart (1)
Lung (1)
Lymph node (1)
Macrophage (1)
Oocyte (1)
Permanent cell line cell (1)
Pluripotent stem cell (1)
Root (1)
Schwann cell (1)
Seedling (1)
Stem cell (1)
T cell (1)
Whole body (1)

Disease

Not Available (1)
Endotoxemia (1)
Chagas disease (1)
Colon cancer (1)
Human immunodeficiency virus infectious disease (1)
Lymphoma (1)
Myocardial ischemia (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (22)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (4)
Gel-based experiment (4)
Data-dependent acquisition (3)
Data-independent acquisition (2)
Mass spectrometry (1)
ESI (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

NextSeq 500 (2)
Illumina NovaSeq 6000 (1)
QTOF - NEGATIVE (1)
QTOF - POSITIVE (1)
Instrument (1)
Orbitrap Eclipse (1)
TimsTOF Pro 2 (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
LTQ Orbitrap Velos (1)

Publication Date

2025 (75)
2023 (42)
2026 (39)
2024 (39)
2021 (34)
2020 (33)
2022 (29)
2018 (24)
2019 (23)
2017 (14)
2015 (13)
2016 (8)
2014 (8)
2012 (5)
2013 (2)
2011 (2)
2010 (2)
2007 (1)

UNIPROT ID/AC

A0A5E1 (1)
A0ELI5 (1)
A0EQY3 (1)
A0JLQ7 (1)
A0JNY3 (1)
A0JNY7 (1)
A0MNP4 (1)
A0PJD7 (1)
A0PJL0 (1)
A0PK78 (1)
A0PK81 (1)
A1A553 (1)
A1A557 (1)
A1A558 (1)
A1A596 (1)
A1A5B6 (1)
A1E5T5 (1)
A1ILG8 (1)
A1L013 (1)
A1L0U3 (1)
A1L0U6 (1)
A1L0V6 (1)
A1L317 (1)
A1L329 (1)
A1L341 (1)
A1L347 (1)
A1L353 (1)
A1L361 (1)
A1L366 (1)
A1L3B6 (1)

ENSEMBL ID

ENSMUSG00000021039 (1)
ENSMUSG00000027651 (1)
ENSMUSG00000098557 (1)
ENSMUSP00000069525 (1)
ENSMUSP00000140201 (1)
ENSMUSP00000141097 (1)
ENSMUSP00000141637 (1)

CHEBI ID

CHEBI:172955 (1)
CHEBI:172954 (1)
CHEBI:172953 (1)
CHEBI:172952 (1)
CHEBI:172951 (1)
CHEBI:18024 (1)
CHEBI:42758 (1)
CHEBI:12936 (1)
CHEBI:24301 (1)
CHEBI:172950 (1)
CHEBI:47014 (1)
CHEBI:46983 (1)
CHEBI:141293 (1)
CHEBI:141282 (1)
CHEBI:141281 (1)
CHEBI:141280 (1)
CHEBI:141279 (1)
CHEBI:141275 (1)
CHEBI:141274 (1)
CHEBI:141273 (1)
CHEBI:136791 (1)
CHEBI:136788 (1)
CHEBI:136479 (1)
CHEBI:136225 (1)
CHEBI:71732 (1)
CHEBI:134271 (1)
CHEBI:71722 (1)
CHEBI:155835 (1)
CHEBI:155834 (1)
CHEBI:66853 (1)

Metabolite Name

Cyanidin conjugate (A9) (1)
Cyanidin conjugate (A5) (1)
Quercetin-3-Glu (1)
Kaempferol 3,7-O-dirhamnopyranoside (1)
Isorhamnetin-3-Glu-7-Rha (1)
Quercetin-3,7-O-a-L-dirhamnopyranoside (1)
Kaempferol-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside (1)
Cyanidin conjugate (A11) (1)
Kaempferol-diHex-Rha (1)
Quercetin-3-O-b-glucopyranosyl-7-O-a-rhamnopyranoside (1)
Cyanidin conjugate (A10) (1)
Quercetin-Hex-diRha (1)
Kaempferol-3-Rha-7-Glu (1)
Quercetin-diHex-Rha (1)
Kaempferol-3-O-a-L-rhamnopyranosyl(1,2)-b-D-glucopyranoside-7-O-a-L-rhamnopyranoside (1)
Quercetin-3-O-a-L-rhamnopyranosyl(1,2)-b-D-glucopyranoside-7-O-a-L-rhamnopyranoside (1)

First Public Date

2025 (78)
2024 (44)
2023 (42)
2026 (39)
2022 (37)
2020 (33)
2021 (29)
2019 (27)
2018 (18)
2017 (16)
2014 (11)
2015 (8)
2016 (3)

Classification

bacteria (4)

Modification

2x(15)N labeled L-lysine (1)

Study type

Transcription profiling by array (12)
RNA-seq of coding RNA (7)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2021 (73)
2022 (73)
2023 (61)
2020 (61)
2019 (57)
2025 (49)
2018 (39)
2024 (37)
2015 (28)
2016 (25)
2017 (16)
2014 (15)
2013 (6)
2012 (5)
2011 (2)
2010 (2)
2026 (1)

Lab affiliation

University of Texas Medical Branch (6)
- Departamento de Imunologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil (1)
1 Institute for Diabetes and Cancer, Helmholtz Munich, Neuherberg, Germany 2 Joint Heidelberg-IDC Translational Diabetes Program, Inner Medicine 1, Heidelberg University Hospital, Heidelberg, Germany 3 German Center for Diabetes Research (DZD), and German Center for Cardiovascular Disease (DZHK), Neuherberg, Germany 4 Chair Molecular Metabolic Control, Technical University Munich, Germany (1)
Bioanalytical Mass Spectrometry, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany (1)
CECAD Research Center, University of Cologne ,Institute of Genetics, Cologne, Germany (1)
Center for Genomics and Systems Biology Department of Biology New York University, USA (1)
Centro de Biología Molecular "Severo Ochoa" Universidad Autónoma de Madrid, 28049 Madrid, SPAIN (1)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany (1)
Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, São Paulo, Brazil (1)
Department head (1)
Department of Molecular Cell Biology Weizmann Institute of Science (1)
Department of Redox Metabolism, Institute of Biochemistry, University of Cologne, Cologne, Germany (1)
Discovery Proteomics Facility, Oxford (1)
Distinguished Research Fellow & Director Genomics Research Center Academia Sinica Taipei 115, Taiwan (1)
Division of Chemistry I, Department of Medical Biochemistr and Biophysics, Karolinska Institutet, Campus Solna, 17165 Stockholm, Sweden (1)
Dpt. of Immunobiology, University of Lausanne (UNIL). Ch.Boveresses 155 CH-1066 Epalinges (1)
EDyP (1)
Faculty of Sciences (1)
Forschungsinstitut für Frauengesundheit Universitäts- Frauenklinik Universitätsklinikum Tübingen Germany (1)
Institut de biologie moléculaire des plantes, CNRS, Université de Strasbourg, 12, rue du Général Zimmer, 67084 Strasbourg, France (1)
Institute of Chemistry, Slovak Academy of Sciences (1)
Institute of Microbiology, University of Greifswald, Germany (1)
Segal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montréal, Quebec, H3T 1E2, Canada Gerald Bronfman Department of Oncology, McGill University, Montréal, Quebec H4A 3T2, Canada Department of Pathology, McGill University, Montréal,Quebec H4A 3J1, Canada (1)
Stanford University (1)
State Key Laboratory of Pharmaceutical Biotechnology，Jiangsu Key Laboratory of Molecular Medicine and Medical School of Nanjing University, Nanjing 210093, China (1)
The Robert and Renee Belfer Chair for the Study of Neurodegenerative Diseases Professor Department of Developmental and Molecular Biology Co-director Institute for Aging Research Albert Einstein College of Medicine (1)
UCSF (1)
Universisty of Greifswald, Institute of Microbiology, Department for Microbial Physiology and Molecular Biology (1)
Université Libre de Bruxelles Institute for Medical Immunology (1)

1309 Results

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