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ProteomicsResource allocation in the archaeon Methanococcus maripaludis during slow growth
We conducted a systems-level study on the physiology of slow growth in the archaeon Methanococcus maripaludis revealing a strategy for acclimation to slow growth that relies on redistribution of energy for cellular maintenance and changes in catabolic and ribosomal activity rather than gene regulati...
ORGANISM(S): Methanococcus Maripaludis S2 (ncbitaxon:267377) 
2021-02-11 | MSV000086844 | MassIVE
ProteomicsGrowth Rate Dependent and Nutrient-specific Gene Expression Resource Allocation in Fission Yeast
Cellular resources are limited and their relative allocation to gene expression programmes determines physiological states and global properties such as the growth rate. Quantitative studies using various growth conditions have singled out growth rate as a major physiological variable explaining rel...
ORGANISM(S): Schizosaccharomyces pombe OY26 
2022-02-24 | PXD027835 | Pride
Resource allocation Schizosaccharomyces pombe Fission yeast Gene expression Transcriptomics Proteomics 
ModelsResource Allocation Model
Resource Allocation Model
2019-03-11 | 558 | FAIRDOMHub
ProteomicsProteome resource allocation in bacteria
A central aim of cell biology is to understand the strategy of gene expression in response to the environment. Here we study gene expression response to metabolic challenges in exponentially growing Escherichia coli using mass spectrometry. Despite enormous complexity in the details of the underlyin...
ORGANISM(S): Escherichia coli 
2015-02-12 | PXD001467 | Pride
Escherichia coli Proteome partition Growth physiology 
ProteomicsRice plants treated with Spirulina-derived biochar optimize resource allocation towards seed production
The use of biofertilizers is becoming an economical and environmentally friendly alternative to promote sustainable agriculture. Biochar from microalgae can be applied to enhance the productivity of food crops through soil improvement, slow nutrient absorption and release, increased water uptake, an...
ORGANISM(S): Oryza sativa (Rice) 
2024-09-16 | PXD051225 | Pride
Agriculture Oryza sativa Microalgae Biostimulant Resource allocation  spirulina Biofertilizer 
GenomicsRegulated resource re-allocation is transcriptionally hard wired into the yeast stress response
Regulated resource re-allocation is transcriptionally hard wired into the yeast stress response
PRJNA1193110 | ENA
ProteomicsA time-resolved multi-omics atlas of oleaginous fungus M. alpina in response to nitrogen availability
One of the most extensively studied questions in oleaginous microorganism is how cells alter gene expression to deal with growth-limiting perturbation, and resource allocation was especially recognized to contribute to TAGs accumulation. However, the strategies of resource allocation are poorly unde...
ORGANISM(S): Mortierella Alpina Atcc 32222 
2020-03-25 | PXD018202 |
GenomicsILP1 mediates resource allocation for reproduction during the induction of diapause in culex mosquitoes.
ILP1 mediates resource allocation for reproduction during the induction of diapause in culex mosquitoes.
PRJNA1075073 | ENA
GenomicsDifferent resource allocation in a Bacillus subtilis population displaying bimodal motility
Different resource allocation in a Bacillus subtilis population displaying bimodal motility
PRJNA690082 | ENA
ProteomicsSpecific growth rate-dependent proteome resource allocation dynamics in Escherichia coli
Cells usually respond to changing growth conditions with a change in the specific growth rate (μ) and adjustment of their proteome to adapt and maintain metabolic efficiency. Description of the principles behind proteome resource allocation is thus important for understanding metabolic regulation in...
ORGANISM(S): Escherichia coli 
2015-02-27 | PXD001594 | Pride
E. coli label-free specific growth rate dependent data 
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