Ribeiro G G - OmicsDI

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Unknown (1619)
Proteomics (82)
Transcriptomics (39)
Genomics (3)
Metabolomics (3)

Organisms

Homo sapiens (49)
Mus musculus (12)
Zea mays (6)
Arabidopsis thaliana (4)
Carica papaya (3)
Aedes aegypti (2)
Rattus norvegicus (2)
Amblyomma sculptum (2)
Cedrela fissilis (2)
Gluconacetobacter diazotrophicus PA1 5 (2)
Passiflora edulis (2)
Portulaca oleracea (2)
Saccharum hybrid cultivar SP80-3280 (2)
Sus scrofa domesticus (2)
Xenopsylla cheopis (2)
Enterococcus faecalis V583 (1)
Populus trichocarpa x Populus deltoides (1)
Anopheles gambiae (1)
Mycobacterium tuberculosis (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Amblyomma americanum (1)
Architeuthis dux (1)
Cricetulus griseus (1)
Glycine max (1)
Lacticaseibacillus rhamnosus GG (1)
Leishmania tarentolae (1)
Loxosceles intermedia (1)
Pediculus humanus corporis (1)
Psidium cattleyanum (1)
Psidium guajava (1)

Repository

pride (80)
biostudies-arrayexpress (39)
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Tissue

Plant cell (19)
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Disease

Oral squamous cell carcinoma (3)
Disease free (2)
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Multiple myeloma (1)
Osteoporosis (1)
Pancreatic ductal adenocarcinoma (1)
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Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (80)
Shotgun proteomics (55)
HDMSE (21)
Bottom-up proteomics (16)
Data-independent acquisition (7)
Affinity purification coupled with mass spectrometry proteomics (4)
SWATH MS (3)
Mass spectrometry (2)
Gel-based experiment (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
MSE (1)

Instrument Platform

Illumina NovaSeq 6000 (4)
Hamamatsu Nanozoomer S60 (1)
I.DOT (Dispendix), C.WASH (CYTENA), Qubit Fluorometer (Thermo Fisher Scientific), Agilent TapeStation 4200 (1)
BD FACSDiscover S8 (1)
Agilent G2565AA and G2565BA Microarray Scanner (1)
AB SOLiD System 3.0 (1)
Illumina HiSeq 2500 (1)
NextSeq 500 (1)
7890A GC coupled to a 5975C inert XL MSD, with a 7683 series injector (G2614A) (1)
LTQ Orbitrap Velos (1)
LTQ Orbitrap (1)
Liquid Chromatography MS - positive - reverse phase (1)
Q Exactive (1)

Publication Date

2022 (17)
2025 (16)
2021 (11)
2023 (11)
2026 (10)
2010 (10)
2018 (7)
2016 (6)
2015 (6)
2020 (6)
2014 (5)
2024 (5)
2011 (4)
2019 (4)
2008 (3)
2017 (2)

CHEBI ID

CHEBI:116314 (1)
CHEBI:132948 (1)
CHEBI:138126 (1)
CHEBI:138368 (1)
CHEBI:139305 (1)
CHEBI:142245 (1)
CHEBI:15318 (1)
CHEBI:15351 (1)
CHEBI:15354 (1)
CHEBI:15355 (1)
CHEBI:15428 (1)
CHEBI:15611 (1)
CHEBI:15676 (1)
CHEBI:15698 (1)
CHEBI:15724 (1)
CHEBI:15727 (1)
CHEBI:15760 (1)
CHEBI:15891 (1)
CHEBI:15963 (1)
CHEBI:16010 (1)
CHEBI:16020 (1)
CHEBI:16040 (1)
CHEBI:16113 (1)
CHEBI:16235 (1)
CHEBI:16238 (1)
CHEBI:16335 (1)
CHEBI:16393 (1)
CHEBI:16410 (1)
CHEBI:16436 (1)
CHEBI:16449 (1)

Metabolite Name

1-kestose (1)
1-methyladenine (1)
1-methyladenosine (1)
12,13-DiHOME (1)
13-(Z)-Docosenamide (1)
2'-O-methyluridine (1)
2'-deoxyadenosine (1)
2'-deoxycytidine (1)
2'-deoxyguanosine (1)
2'-deoxyinosine (1)
2'-deoxyuridine (1)
2,6-dihydroxybenzoic acid (1)
4-hydroxypyridine (1)
5-oxoproline (1)
9,10-DiHOME (1)
9-(Z)-Octadecenamide (1)
Aeruclynamide D (1)
Brasilionolide B (1)
CDP-choline (1)
Dihydroxylycopene diglucoside diester (1)
FAD (1)
FMN (1)
Fosinopril (1)
Leukotriene E4 methyl ester* (1)
N-acetylasparagine (1)
N-acetylcitrulline (1)
N-acetylglycine (1)
N-acetylhistamine (1)
N-acetylhistidine (1)
N-acetylphenylalanine (1)

First Public Date

2019 (2)

Modification

0.984 (1)
15.99491 (1)
43.00581 (1)
57.02146 (1)

Study type

Transcription profiling by array (22)
Comparative genomic hybridization by array (4)
RNA-seq of coding RNA (3)
ChIP-chip by array (2)
Genotyping by array (2)
RNA-seq of coding RNA from single cells (2)
Human - Methylation microarray (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (219)
2025 (200)
2021 (185)
2023 (185)
2024 (164)
2020 (154)
2018 (95)
2019 (92)
2017 (61)
2015 (58)
2016 (55)
2014 (42)
2026 (38)
2013 (24)
2010 (21)
2011 (18)
2012 (18)
2009 (13)
2008 (7)
2005 (2)
2004 (2)
2001 (2)
2007 (1)
2003 (1)
1999 (1)

Lab affiliation

Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil. (5)
CEA-Marcoule, DSV-Li2D, 30207 Bagnols-sur-Cèze, France (2)
Laboratory of Malaria and Vector Research, NIAID, NIH (2)
Laboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, 2000, Campos dos Goytacazes 28013-602, Rio de Janeiro, Brazil (2)
Laboratório de Biotecnologia (Unidade de Biologia Integrativa, Setor de Genômica e Proteômica), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, 2000, Campos dos Goytacazes, Rio de Janeiro, Brazil (2)
Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia Universidade Estadual do Norte Fluminense Darcy Ribeiro Av. Alberto Lamego 2000 Campos dos Goytacazes-RJ, Brazil 28013-602 (2)
Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Centro de Biociências e Biotecnologia, Laboratório de Química e Função de Proteínas e Peptídeos, Prédio P5, Sala 228, Bairro Parque Califórnia, Campos dos Goytacazes, RS - CEP: 28013-602 (2)
1) Instituto de Investigação e Inovação em Saúde (i3S), Universidade do Porto, Porto, Portugal 2) Instituto de Engenharia Biomédica (INEB), Universidade do Porto, Porto, Portugal 3) Instituto de Ciências Biomédicas Abel Salazar (ICBAS), Universidade do Porto, Porto, Portugal (1)
Biomolecular Mass Spectrometry and Proteomics Bijvoet Center for Biomolecular Reseach and Utrecht Institute of Pharmaceutical Sciences Utrecht University Padualaan 8, 3584 CH Utrecht, The Netherland (1)
Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Sao Paulo, Brazil. (1)
Cambridge Institute for Medical Research, University of Cambridge, UK (1)
Center FOr Cancer Research Development, Proteomics Core Facility, Rhode Island Hospital, Providence, RI, USA (1)
Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark. (1)
Center for Neuroscience and Cell Biology of the University of Coimbra, Portugal (1)
Characterization and Comparability Laboratory, NIBRT – National Institute for Bioprocessing Research and Training, Foster Avenue, Belfield, Blackrock, Dublin, Ireland (1)
Computational Mass Spectrometry & Proteomics Group Carlos Chagas Institute, Fiocruz - PR Brazil (1)
Computational and Experimental Biology Group NOVA MEDICAL SCHOOL / FACULDADE DE CIÊNCIAS MÉDICAS UNIVERSIDADE NOVA DE LISBOA Rua Câmara Pestana, 6-6A | 1150-082 Lisboa Portugal (1)
Computational and Experimental Biology Group NOVA MEDICAL SCHOOL / FACULDADE DE CIÊNCIAS MÉDICAS UNIVERSIDADE NOVA DE LISBOA Rua Câmara Pestana, 6-6A | 1150-082 Lisboa Portugal E-mail: rune.matthiesen@nms.unl.pt | www.nms.unl.pt (1)
Departamento de Fisiologia, Laboratório de Fisiologia da Nutrição, Universidde Federal de São Paulo, Brasil (1)
Departamento de Parasitologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil (1)
Department of Chemistry, Federal University of São Carlos, 13565-905 São Carlos, SP, Brazil (1)
Department of Molecular and Integrative Biosciences University of Helsinki (1)
Department of Physiology & Membrane Biology, University of California Davis School of Medicine (1)
Entomology Dept., 740 Russell Labss, University of Wisconsin-Madison, USA (1)
Escola Superior de Saúde Instituto de Biomedicina - iBiMED Universidade de Aveiro 3810-193 Aveiro Portugal (1)
General Biology Department, Universidade Federal de Viçosa, Brazil (1)
Group Leader (1)
Host-Pathogen Interface Laboratory (1)
ICR (1)
IHU Mediterranee infection (1)

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xref:PubMed:32199375 (1)

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Pentose phosphate pathway is essential for the resistance of Gluconacetobacter diazotrophicus PAL5 to zinc

Zinc (Zn) is an essential metal for the metabolism of bacteria, but in high concentrations, it may be toxic to cells. Gluconacetobacter diazotrophicus is a Gram-negative bacterium characterized by promotes plant growth. Moreover, G. diazotrophicus can survive under challenging conditions, including ...

ORGANISM(S): Gluconacetobacter diazotrophicus PA1 5

2026-09-11 | PXD065016 | Pride

A tick salivary protein targets cathepsin G and chymase and inhibits host inflammation and platelet aggregation.

Not available

S-EPMC3031492 | biostudies-literature

Identification of an Ascaris G protein-coupled acetylcholine receptor with atypical muscarinic pharmacology.

Not available

S-EPMC2713365 | biostudies-literature

Cyclin G and the Polycomb Repressive complexes PRC1 and PR-DUB cooperate for developmental stability.

Not available

S-EPMC6065198 | biostudies-literature

A constitutively active G protein-coupled acetylcholine receptor regulates motility of larval Schistosoma mansoni.

Not available

S-EPMC4607267 | biostudies-literature

Metabolomics Insights in Early Childhood Caries

Dental caries is characterized by a dysbiotic shift at the biofilm-tooth surface interface, yet comprehensive biochemical characterizations of the biofilm are scant. We used metabolomics to identify biochemical features of the supragingival biofilm associated with early childhood caries (ECC) preval...

2021-01-29 | MTBLS2215 | MetaboLights

Description of a new species of the Neotropical cichlid genus Gymnogeophagus Miranda Ribeiro, 1918 (Teleostei: Cichliformes) from the Middle Parana basin, Misiones, Argentina.

Not available

S-EPMC6374015 | biostudies-literature

EGF+61 A>G polymorphism does not predict response to first-generation EGFR tyrosine kinase inhibitors in lung cancer patients.

Not available

S-EPMC7529554 | biostudies-literature

Developmental stability: a major role for cyclin G in drosophila melanogaster.

Not available

S-EPMC3188557 | biostudies-literature

Serotonin signaling in Schistosoma mansoni: a serotonin-activated G protein-coupled receptor controls parasite movement.

Not available