Ribosome-associated quality control

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Transcriptomics (680)
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Mass Spectrometry (46)
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Instrument Platform

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NA (2)
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2007 (18)
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2018 (10)
2005 (8)
2006 (6)
2004 (3)

UNIPROT ID/AC

G1SVB3_RABIT (1)
A0A5F9C4L7_RABIT (1)
G1TKE5_RABIT (1)
G1T4D5_RABIT (1)
G1U8G0_RABIT (1)
G1SSN8_RABIT (1)
G1T4N8_RABIT (1)
G1SMH9_RABIT (1)
G1U2A1_RABIT (1)
G1U3Q6_RABIT (1)
A0A5F9CGP0_RABIT (1)
SAA2_RABIT (1)
G1T2S0_RABIT (1)
G1TDT3_RABIT (1)
CPNS1_RABIT (1)
G1T8H5_RABIT (1)
G1TL08_RABIT (1)
G1SZP6_RABIT (1)
A0A5F9CNA2_RABIT (1)
G1TKV1_RABIT (1)
G1TSW8_RABIT (1)
U3KM54_RABIT (1)
G1SDU8_RABIT (1)
G1SJQ2_RABIT (1)
A0A5F9D7S5_RABIT (1)
G1TEP2_RABIT (1)
G1U207_RABIT (1)
G1SPW1_RABIT (1)
G1SN00_RABIT (1)
G1TN29_RABIT (1)

Metabolite Name

TG(22:0/o-18:0/20:1(11Z)) (1)
TG(24:0/18:1(11Z)/o-18:0) (1)
TG(24:0/18:1(9Z)/o-18:0) (1)
TG(22:1(13Z)/20:0/o-18:0) (1)
TG(24:0/o-18:0/18:1(9Z)) (1)
TG(24:1(15Z)/18:0/o-18:0) (1)
TG(24:0/o-18:0/18:1(11Z)) (1)
TG(18:0/24:1(15Z)/o-18:0) (1)
TG(18:1(11Z)/24:0/o-18:0) (1)
TG(18:1(9Z)/24:0/o-18:0) (1)
TG(20:1(11Z)/22:0/o-18:0) (1)
TG(20:0/o-18:0/22:1(13Z)) (1)
TG(22:0/20:1(11Z)/o-18:0) (1)
TG(18:0/o-18:0/24:1(15Z)) (1)
TG(20:0/22:1(13Z)/o-18:0) (1)
Madecassoside (1)
O-b-D-glucopyranosyl-(1->3)-O-2-(acetylamino)-2-deoxy-b-D-glucopyranosyl-(1->3)-O-[6-deoxy-a-L-galactopyranosyl-(1->4)]-O-b-D-galactopyranosyl-(1->4)-O-[6-deoxy-a-L-galactopyranosyl-(1->3)]-D-Glucose (1)
CDP-DG(16:1(9Z)/18:2(9Z,12Z)) (1)
CDP-DG(18:2(9Z,12Z)/16:1(9Z)) (1)
Myristoleoyl-CoA (1)
5Z-tetradecenoyl-CoA (1)
(2E)-Tetradecenoyl-CoA (1)
TG(15:0/22:5(4Z,7Z,10Z,13Z,16Z)/24:0) (1)
TG(15:0/24:0/22:5(4Z,7Z,10Z,13Z,16Z)) (1)
TG(15:0/22:5(7Z,10Z,13Z,16Z,19Z)/24:0) (1)
TG(24:0/15:0/22:5(7Z,10Z,13Z,16Z,19Z)) (1)
TG(15:0/22:4(7Z,10Z,13Z,16Z)/24:1(15Z)) (1)
TG(24:1(15Z)/15:0/22:4(7Z,10Z,13Z,16Z)) (1)
TG(15:0/24:1(15Z)/22:4(7Z,10Z,13Z,16Z)) (1)
TG(24:0/15:0/22:5(4Z,7Z,10Z,13Z,16Z)) (1)

First Public Date

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2020 (10)
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2024 (8)
2023 (6)
2021 (6)
2019 (6)
2017 (4)
2018 (2)
2016 (1)

Classification

bacteria (1)

Study type

Transcription profiling by array (360)
RNA-seq of coding RNA (159)
ChIP-seq (27)
Comparative genomic hybridization by array (24)
Other (24)
Unknown experiment type (12)
RNA-seq of non coding RNA (11)
ChIP-chip by array (10)
RNA-seq of coding RNA from single cells (10)
RNA-seq of total RNA (7)
Ribo-seq (6)
RIP-seq (5)
Transcription profiling by tiling array (4)
ChIP-chip by tiling array (3)
DNA-seq (3)
Methylation profiling by array (3)
Transcription profiling by RT-PCR (2)
MicroRNA profiling by high throughput sequencing (2)
MicroRNA profiling by array (2)
Proteomic profiling by array (2)
Genotyping by high throughput sequencing (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Cell line - Single-cell sequencing (1)
RNA-seq of non coding RNA from single cells (1)
One-color microarray (1)
Human - High-throughput sequencing (1)
Translation profiling (1)
High-throughput sequencing (1)
RNAi profiling by array (1)

Release Date

2014 (93)
2010 (80)
2012 (76)
2015 (72)
2013 (71)
2016 (68)
2011 (53)
2025 (47)
2024 (37)
2023 (37)
2022 (35)
2021 (31)
2020 (29)
2009 (28)
2026 (27)
2017 (21)
2018 (20)
2019 (19)
2008 (18)
2007 (18)
2005 (8)
2006 (6)
2004 (3)

Lab affiliation

UCSD (15)
MRC Toxicology Unit, University of Cambridge, UK (4)
Department of Cellular Biochemistry, Max Planck Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany (2)
Biomedical Research Institute, Foundation for Research and Technology-Hellas, Ioannina, Greece. (1)
Department of Biochemistry, Institute of Chemistry, University of São Paulo, 05508-000, São Paulo, SP, Brazil. (1)
Department of Molecular Structural Biology, Max-Planck-Institute of Biochemistry, 82152 Martinsried, Germany (1)
Johns Hopkins School of Medicine, Department of Molecular Biology and Genetics, Baltimore, MD, USA (1)
Universite Laval-CHU de Quebec Research Center (1)
Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan (1)
Univeristy Of Toronto (1)
Max Perutz Laboratories Vienna, Vienna BioCenter, Vienna, Austria Medical University of Vienna, Vienna, Austria. (1)
Department of Microbiology and Physiological Systems UMass Chan Medical School 368 Plantation Street Worcester, MA 01655 (1)
Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern (1)
Head of the Crick Mass Spectrometry Proteomics Platform (1)
Department of Biology, Concordia University, Montreal, Quebec, Canada (1)
1 The Finsen Laboratory, Rigshospitalet, Faculty of Health Sciences, University of Copenhagen, Denmark 2 Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Copenhagen, Denmark 4 Novo Nordisk Foundation Center for Stem Cell Biology, DanStem, Faculty of Health Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Faculty of Biology, MSBioLMU, LMU München, Großhaderner Str. 2-4, 82152, Planegg, Germany (1)
Cell and Chemical Biology Leiden University Medical Center (1)
Pathology, Stanford University (1)
The Francis Crick Institute (1)
Institut de Biologie Moléculaire des Plantes, UPR 2357 du CNRS, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg Cedex, France (1)
Carnegie MS Facility (1)
Institute of Molecular Biology (IMB), Mainz, Germany (1)
Center for Microbial Ecology and Technology (CMET), Faculty of Bioscience Engineering Ghent University, Coupure Links 653, 9000 Ghent, Belgium, Center for Advanced Process Technology for Urban Resource recovery (CAPTURE), Frieda Saeysstraat 1, 9052 Ghent, Belgium (1)
Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Bern, Switzerland (1)
Erasmus MC (1)
University of Maryland, College Park (1)
Lund University (1)

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Mapping the mammalian ribosome quality control complex interactome using proximity labeling approaches

Proximity-based (APEX and BioID) and standard affinity capture proteomics of the mammalian ribosome associated quality control complex

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2018-01-31 | MSV000082006 | MassIVE

Ribosome quality control activity potentiates vaccinia virus protein synthesis during infection

Ribosomes are highly abundant cellular machines that perform the essential task of translating the genetic code into proteins. Cellular translation activity is finely tuned and proteostasis insults, such as those incurred upon viral infection, activate stress signaling pathways that result in transl...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Vaccinia Virus Wr (ncbitaxon:10254)

2021-01-05 | MSV000086660 | MassIVE

The RNA-binding ubiquitin ligase MKRN1 acts as a sensor for ribosome-associated quality control of poly(A)-translation

Human cells have evolved multiple quality control mechanisms to ensure protein homeostasis by detecting aberrant mRNAs and protein products which are condemned for rapid decay. Translating ribosomes that run into poly(A) tails are terminally stalled, followed by ribosome recycling and rapid decay of...

ORGANISM(S): Homo sapiens (Human)

2019-08-19 | PXD011772 | Pride