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ProteomicsPeptimapper - Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes
Background: Accurate structural annotation of genomes is still a challenge, despite the progress made over the past decade. The prediction of gene structure remains difficult, especially for eukaryotic species, and is often erroneous and incomplete. We used a proteogenomics strategy, taking advantag...
ORGANISM(S): Ectocarpus siliculosus (Brown alga) 
2019-01-22 | PXD010618 | Pride
Genome annotation Peptide sequence tag Proteogenomics Proteomics Tandem mass spectrometry Bioinformatics 
UnknownEssential role of Glu-C66 for menaquinol oxidation indicates transmembrane electrochemical potential generation by Wolinella succinogenes fumarate reductase.
Not available
S-EPMC27176 | biostudies-literature
UnknownSEMPAI: a Self-Enhancing Multi-Photon Artificial Intelligence for Prior-Informed Assessment of Muscle Function and Pathology.
Not available
S-EPMC10558688 | biostudies-literature
UnknownBiodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies.
Not available
S-EPMC6499058 | biostudies-literature
UnknownPatterns of host use by brood parasitic Maculinea butterflies across Europe.
Not available
S-EPMC6388033 | biostudies-literature
ProteomicsChemoselective umpolung of thiols to episulfoniums for cysteine bioconjugation
Modification of native cysteine is an important tool in protein research and relies on fast and chemoselective reactions under bioambient conditions. Nucleophilic cysteine can be functionalized with electrophiles, such as maleimides, that carry specific chemical groups, depending on the desired appl...
ORGANISM(S): Escherichia Coli 
2023-12-20 | PXD038723 | JPOST Repository
UnknownNUDIX hydrolases target specific inositol pyrophosphates and regulate phosphate homeostasis and bacterial pathogen susceptibility in Arabidopsis.
Not available
S-EPMC12678693 | biostudies-literature
UnknownA Syndromic Neurodevelopmental Disorder Caused by Mutations in SMARCD1, a Core SWI/SNF Subunit Needed for Context-Dependent Neuronal Gene Regulation in Flies.
Not available
S-EPMC6451697 | biostudies-literature
UnknownAssociation of polygenic score and the involvement of cholinergic and glutamatergic pathways with lithium treatment response in patients with bipolar disorder.
Not available
S-EPMC11041653 | biostudies-literature
UnknownUsing multi-trait polygenic scores to predict lithium responsiveness in patients with bipolar disorder.
Not available
S-EPMC12803305 | biostudies-literature
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