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TranscriptomicsIdentification of re-capping substrates for the cytoplasmic capping enzyme complex
The analysis of capped RNAs by massively parallel sequencing has identified a large number of previously unknown transcripts, some of which are small RNAs and others are 5M-bM-^@M-^Y truncated forms of RefSeq genes. The latter may be generated by endonuclease cleavage or by stalling of Xrn1 at defi...
ORGANISM(S): Homo sapiens 
2012-12-20 | E-GEOD-36729 | biostudies-arrayexpress
ProteomicsCytoplasmic capping enzyme interactome
Formaldehyde crosslinking and Proximity-dependent biotinylation methods were applied to study the cytoplasmic capping enzyme interactome via 1D-LC-MS/MS. The raw data were searched against Uniprot human database modified to contain our designed protein sequences using the Thermo Proteome Discoverer ...
ORGANISM(S): Homo Sapiens (human) 
2018-08-30 | PXD010368 | JPOST Repository
UnknownPost-transcriptional capping generates coenzyme A-linked RNA.
Not available
S-EPMC10761072 | biostudies-literature
UnknownRNA-binding proteins and heat-shock protein 90 are constituents of the cytoplasmic capping enzyme interactome.
Not available
S-EPMC6204893 | biostudies-literature
UnknownRegulation of flavivirus RNA synthesis and capping.
Not available
S-EPMC3797245 | biostudies-literature
TranscriptomicsGenome-wide study of the MSL1 effect on gene expression and mRNA capping efficiency
Measurement of capping efficiency (by 5'CAP and 5'noCAP sequencing) in male (S2) and female (Kc) Drosophila melanogaster cells upon depletion of MSL1 by dsRNA compared to the eGFP RNAi control. The measurement of capping efficiency was combined with gene expression measurement by strand specific RNA...
ORGANISM(S): Drosophila melanogaster 
2023-09-30 | E-MTAB-2235 | biostudies-arrayexpress
GenomicsLandscape of RNA NAD+ capping in Arabidopsis unopened flower bud
Landscape of RNA NAD+ capping in Arabidopsis unopened flower bud
PRJNA596802 | ENA
ProteomicsEfficient plasmid-based rescue of T7 RNA polymerase-driven calicivirus reverse genetics systems in mammalian cells using vaccinia virus RNA capping enzymes C4PR_LIV
Calicivirus reverse genetics systems have typically relied on either in vitro transcribed RNA or plasmid-based rescue with enzyme supplementation. Plasmid based calicivirus rescue relies on supplementation with Fowl Pox T7 RNA polymerase which has cost and labour considerations. Here we present a no...
ORGANISM(S): Mesocricetus auratus (Golden hamster) Murine norovirus 
2026-05-13 | PXD074707 | Pride
Rna capping Calicivirus Norovirus Reverse genetics 
GenomicsLandscape of RNA NAD+ capping in Arabidopsis seedling with ABA treatment
Landscape of RNA NAD+ capping in Arabidopsis seedling with ABA treatment
PRJNA596803 | ENA
GenomicsHepacivirus RNA capping study
Analysis of non-canonical RNA capping in the Hepacivirus genus
PRJEB89091 | ENA
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