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TranscriptomicsPrimary and adjacent non-malignant tissue samples of 100 HCC patients (mRNA)
Genome-wide mRNA expression profiles of 100 primary and matched non-malignant tissues of HCC patients from a Singapore patient cohort. HCC is a hetergenous disease and it is important to understand the underlying molecular mechanisms. Here, we studied the role of microRNAs in HCC by integrating micr...
ORGANISM(S): Homo sapiens 
2016-02-18 | E-GEOD-62043 | biostudies-arrayexpress
TranscriptomicsGastric cancer subtyping (Singapore Patient Cohort, batch B)
Genome-wide mRNA expression profiles of 56 primary gastric tumors from the Singapore patient cohort, batch B. Like many cancers, gastric adenocarcinomas (gastric cancers) show considerable heterogeneity between patients. Thus, there is intense interest in using gene expression profiles to discover s...
ORGANISM(S): Homo sapiens 
2014-09-05 | E-GEOD-34942 | biostudies-arrayexpress
TranscriptomicsTherapeutic interference with mTorc1 restricts inflammation-associated and Stat3-dependent gastro-intestinal tumourigenesis in mice
Gp130 receptor engagement on neoplastic cells provides a link by which an inflammatory microenvironment facilitates tumour promotion. Although hyperactivation of the gp130-dependent Stat3 signalling node is commonly observed in solid tumours, Stat3 remains a challenging therapeutic target. To mimic ...
ORGANISM(S): Mus musculus 
2013-01-29 | E-GEOD-35808 | biostudies-arrayexpress
Genomicseaa4975f-4514-44a7-baa4-9404c42156a2 - samples
Whole genome sequencing dataset of 54 tumor/normal samples of 25 cHCC-ICC cases.
EGAD00001005181 | EGA
Genomics61f6508f-ab66-4d36-ad86-028a0ff97746 - samples
The whole exome sequencing data of 291 tumor/normal samples from 121 cHCC-ICC cases.
EGAD00001005183 | EGA
Genomics77745784-0040-45d2-af14-10f27f05a48d - samples
The RNA-seq data of 97 tumor samples from 77 cHCC-ICC cases, data of two other HCC tumor samples were also included.
EGAD00001005182 | EGA
GenomicsGenomic and transcriptomic profiling of combined hepatocellular and intrahepatic cholangiocarcinoma reveals distinct molecular subtypes
We performed genomic and transcriptomic sequencing of 133 combined hepatocellular and intrahepatic cholangiocarcinoma (cHCC-ICC) cases, including separate, combined, and mixed subtypes.
EGAS00001003093 | EGA
GenomicsPKU_cHCC-ICC DAC
Data Access Committee EGAC00001001273
EGAC00001001273 | EGA
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