Rp-lc ms/ms - OmicsDI

Show results for

Proteomics (1190)
Unknown (440)
Metabolomics (229)
Other (21)
Transcriptomics (7)
Genomics (3)

Organisms

Saccharomyces cerevisiae (1092)
Rattus norvegicus (1092)
Homo sapiens (1092)
Shigella flexneri (1092)
Allexis (1092)
Shigella (1092)
Listeria monocytogenes (1092)
Arabidopsis thaliana (1092)
Mus musculus (1092)
Schizosaccharomyces pombe (1091)
Sinorhizobium meliloti BL225C (1091)
Homo sapiens (10)
Mus musculus (9)
Arabidopsis thaliana (3)
Rattus norvegicus (3)
Gossypium (2)
Triticum aestivum (2)
Bos taurus (1)
Remus (1)
Philinopsis speciosa (1)
Rhinoceros (1)
Bungarus multicinctus (1)
Naja samarensis (1)
Danio rerio (1)
Gallus gallus (1)
Marinobacter (1)
food metagenome (1)
Hordeum vulgare (1)
Secale cereale (1)
Halobacterium salinarum NRC-1 (1)

Organisms

Bos taurus (1)
Homo sapiens (1)

Repository

pride (1092)
GNPS (143)
MassIVE (92)
MetaboLights (86)
biostudies-arrayexpress (8)
GPMDB (7)
iProX (5)
jPOST (5)
PanoramaPublic (4)
PeptideAtlas (4)
geo (2)
ENA (2)

Tissue

Cell culture (238)
Epithelial cell (72)
Brain (71)
Permanent cell line cell (41)
Blood plasma (38)
Liver (37)
Blood (24)
Whole body (22)
Plant cell (20)
Cell suspension culture (20)
Fibroblast (20)
Heart (18)
Lung (18)
Skin (17)
Macrophage (17)
Leaf (17)
Blood serum (16)
Blood cell (16)
Cerebrospinal fluid (14)
T cell (14)
Oocyte (13)
Colon (13)
Embryo (12)
Spleen (12)
Kidney (12)
Melanocyte (11)
Venom (10)
Skeletal muscle (10)
Root (10)
Early embryonic cell (9)

Disease

Disease free (24)
Breast cancer (22)
Acute leukemia (13)
Cervix carcinoma (10)
Melanoma (8)
Colon cancer (8)
Not Available (7)
Prostate adenocarcinoma (7)
Chagas disease (6)
Pancreatic cancer (6)
Wounds and Injuries (6)
Parkinson's disease (5)
Brain cancer (5)
Type 2 diabetes mellitus (5)
Retinal degeneration (4)
Skin cancer (4)
Chronic myeloid leukemia (4)
Chronic lymphocytic leukemia (4)
Malignant neoplasm of ovary (4)
Bone cancer (3)
Brain glioblastoma multiforme (3)
Lung adenocarcinoma (3)
Cardiovascular system disease (3)
Periodontitis (3)
Amyotrophic lateral sclerosis (3)
RNAi_reagent (2)
Non-alcoholic steatohepatitis (2)
Head and neck cancer (2)
Viral infectious disease (2)
Hypertensive (1)

Technology Type

Mass Spectrometry (1092)
Shotgun proteomics (679)
Bottom-up proteomics (150)
Data-dependent acquisition (113)
Affinity purification coupled with mass spectrometry proteomics (82)
Gel-based experiment (74)
Mass spectrometry (66)
SWATH MS (47)
Top-down proteomics (43)
Data-independent acquisition (36)
SRM/MRM (27)
Mass spectrometry assay (18)
Chemical cross-linking coupled with mass spectrometry proteomics (17)
Immunopeptidomics (8)
NMR spectroscopy (5)
All-ion fragmentation (5)
HDMSE (3)
NMR spectroscopy assay (2)
Metaproteomics (2)
MSE (2)
Proteogenomics (1)
Mass spectrometry imaging (1)
RNA mass spectrometry (1)
DiaPASEF (1)

Instrument Platform

MaXis (91)
Q Exactive (43)
Orbitrap Fusion Lumos (23)
Impact (13)
Q Exactive HF (10)
Orbitrap Exploris 480 (8)
Instrument (7)
LTQ Orbitrap Elite (7)
LTQ Orbitrap (6)
MS:1000031 (5)
Orbitrap Fusion (5)
Impact II (4)
Orbitrap Eclipse (4)
LTQ Orbitrap Velos (3)
Q Exactive HF-X (3)
TimsTOF fleX (2)
TimsTOF Pro (2)
Orbitrap Astral (2)
LTQ XL (2)
Illumina HiSeq 2000 (1)
Orbitrap Q Exactive HF (Thermo scientific instrument model) (1)
AmaZon SL (Bruker Daltonics amaZon series) (1)
TSQ Quantum Access (1)
MaXis Impact (1)
Q Exactive|MS:1001911 (1)
Autoflex III TOF/TOF smartbeam (1)
X500R QTOF (1)
Compact (1)
LC/MS/MS (1)
QSTAR XL (1)

Publication Date

2022 (171)
2023 (146)
2025 (140)
2021 (138)
2020 (121)
2024 (117)
2018 (115)
2026 (112)
2019 (102)
2017 (102)
2016 (63)
2015 (52)
2014 (24)
2013 (5)
2005 (3)
2012 (2)
2009 (1)
2008 (1)
2006 (1)
2004 (1)
2003 (1)
2011 (1)

UNIPROT ID/AC

P38431-2 (3)
P06208-2 (3)
P07263-2 (2)
Q12337 (1)
P32874 (1)
R0020C (1)
Q01532 (1)
P21269-3 (1)

CHEBI ID

CHEBI:16335 (26)
CHEBI:16750 (26)
CHEBI:17596 (24)
CHEBI:16704 (23)
CHEBI:30769 (23)
CHEBI:16856 (21)
CHEBI:15891 (21)
CHEBI:15428 (21)
CHEBI:28300 (19)
CHEBI:15354 (19)
CHEBI:26271 (18)
CHEBI:28044 (18)
CHEBI:17750 (18)
CHEBI:17015 (18)
CHEBI:16027 (18)
CHEBI:16708 (18)
CHEBI:17822 (17)
CHEBI:32816 (17)
CHEBI:29016 (17)
CHEBI:16040 (17)
CHEBI:17562 (17)
CHEBI:7916 (17)
CHEBI:17568 (17)
CHEBI:15741 (17)
CHEBI:17533 (17)
CHEBI:27897 (17)
CHEBI:17202 (16)
CHEBI:17345 (16)
CHEBI:16811 (16)
CHEBI:16695 (16)

Metabolite Name

Taurine (13)
Adenosine (13)
L-Tryptophan (11)
Guanosine (10)
Uridine (10)
Cytosine (9)
Glutathione (9)
L-Phenylalanine (9)
Cytidine (9)
Guanosine (9)
Sn-Glycero-3-phosphocholine (8)
Inosine (8)
Proline (8)
L-Kynurenine (8)
Hypoxanthine (8)
Creatine (8)
Adenine (8)
Riboflavin (8)
Inosine (8)
UDP (7)
GMP (7)
CDP-choline (7)
Uridine (7)
Uracil (7)
Xanthine (7)
AMP (7)
Isoleucine (7)
Phenylalanine (7)
Serine (7)
UMP (7)

First Public Date

2021 (1)
2013 (1)

Modification

15.994915 (9)
42.010565 (8)
57.021464 (8)
-17.026549 (7)
4x(15)N labeled L-arginine (4)
45.029395 (3)
58.005479 (3)
4-tetrahydrothiazine-3-carboxylic acid (3)
Not available (3)
10.008269 (2)
-18.010565 (2)
2x(15)N labeled L-lysine (2)
4 (2)
26.01565 (1)
32.056407 (1)
56.026215 (1)
59.036279 (1)
0.984016 (1)
4-dinitrophenyl modified residue (1)
79.966331 (1)
3x(2)H labeled N6-acetyl-L-lysine (1)
71.037114 (1)
4x(2)H labeled dimethylated residue (1)
15.977156 (1)
+3amu) (1)

Study type

Transcription profiling by array (4)
RNA-seq of coding RNA (2)
Proteomic profiling by mass spectrometer (1)
Other (1)

Release Date

2021 (62)
2022 (56)
2025 (43)
2023 (36)
2020 (36)
2024 (34)
2017 (25)
2015 (22)
2018 (22)
2016 (20)
2019 (15)
2013 (14)
2012 (12)
2014 (12)
2011 (11)
2008 (8)
2009 (6)
2026 (5)
2010 (5)
2007 (3)
2005 (1)

Lab affiliation

Functional Proteomics, ICR (13)
Proteomics Core Facility, Biozentrum, University of Basel, Switzerland (12)
Biozentrum, University of Basel, Switzerland (8)
Department of Biotechnology, TU Delft, The Netherlands (8)
Institute of Cancer Research, London (7)
The Institute of Cancer Research (7)
PROBE (6)
School of Biochemistry, Faculty of Life Sciences, University of Bristol,UK (6)
Instituto de Biotecnología, Grupo de Bioquímica y Parasitología Molecular, Departamento de Parasitología, Universidad de Granada, Granada, Spain. (6)
USDA-ARS (6)
Wellcome Trust Sanger Institute (6)
Biozentrum, University of Basel, 4056 Basel, Switzerland (5)
Nestlé Research – Nestlé Institute of Food Safety & Analytical Sciences (5)
Department of Biotechnology, Delft University of Technology, The Netherlands. (5)
University of Bristol (5)
University of Oxford (5)
Science for Life Laboratory, Department of Medical Biochemistry and Microbiology, Uppsala University, SE-751 23 Uppsala, Sweden. (4)
Proteomics Team, Nestlé Institute of Health Sciences, Lausanne, Switzerland (4)
Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC (4)
Stowers Institute for Medical Research (4)
Department of Molecular Biology and Genetics, Aarhus University, Denmark (4)
Professor (4)
Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Professor of Cell Biology and NHSBT Principal Investigator,School of Biochemistry,University of Bristol (3)
Center for Translational Vision Research, Department of Ophthalmology, Gavin Herbert Eye Institute, University of California, Irvine, Irvine, CA, 92697, USA; Department of Physiology and Biophysics, Department of Chemistry, Department of Molecular Biology and Biochemistry; University of California, Irvine, Irvine, CA, 92697, USA (3)
Department of Pharmaceutical Chemistry and Bioanalytics Institute of Pharmacy Martin Luther University Halle-Wittenberg Halle (Saale), Germany (3)
Biozentrum, University of Basel, CH-4056 Basel, Switzerland (3)
Tianjin Medical University General Hospital (3)
Department of Biochemistry, Biomedical Sciences Building, University of Bristol, Bristol, United Kingdom (3)
Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012 Bern, Switzerland (3)

Previous page
1 / 189
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 189
Next page

Sort by:

Relevance

Page size

Offline pentafluorophenyl (PFP)-RP prefractionation as an alternative to high-pH RP for comprehensive LC-MS/MS proteomics and phosphoproteomics.

Not available

S-EPMC5704945 | biostudies-literature

LC-MS/MS metabolomics unravels the resistant phenotype of carbapenemase-producing Enterobacteriaceae

Introduction: The degree of antimicrobial resistance demonstrated by carbapenemase-producing Enterobacteriaceae (CPE) represents a growing public health challenge. Conventional methods for detecting CPE involve culture-based techniques with lengthy incubation steps. There is a ne...

2025-08-04 | MTBLS10129 | MetaboLights

Reverse-Phase High-Performance Liquid Chromatography/Mass Spectrometry (RP-LC-MS/MS, Label-Free Method) for Component Analysis of Gonadotropin Drugs

In assisted reproductive technology (ART), controlled ovarian hyperstimulation (COS) plays an important role in guiding treatment progress and determining success. Many ovulation-inducing agents are used in this process, including human menopausal gonadotropin (HMG), recombinant follicle-stimulating...

ORGANISM(S): Homo Sapiens

2025-12-31 | PXD072543 |

Assessment of global proteome in LNCaP cells by 2D-RP/RP LC-MS/MS following sulforaphane exposure.

Not available

S-EPMC4666544 | biostudies-literature

High-resolution LC-MS/MS lipidomics characterization of wild-type and ATG7-deficient mouse renal proximal tubule cells

This study provides an untargeted lipidomics investigation of ATG7-deficient (cKO) mouse renal proximal tubule cells compared to wild-type (WT) controls to evaluate lipidomic alterations associated with autophagy deficiency. Lipids were extracted from cell culture wells using a single-phase isopropa...

2026-09-30 | MTBLS15861 | MetaboLights

Objective molecular criteria for oocyte quality and developmental potential: a proteomic study in inbred mice

Current understanding of oocyte quality and developmental potential maintains that stochastic or epigenetic processes modulate the action of determinants that are laid in the oocyte during oogenesis. These determinants are considered to be rather conserved across mice, leading different strains of m...

ORGANISM(S): Mus musculus

2016-06-18 | E-MTAB-5013 | biostudies-arrayexpress

Multidimensional Separation Using HILIC and SCX Pre-fractionation for RP LC-MS/MS Platform with Automated Exclusion List-based MS Data Acquisition with Increased Protein Quantification.

Not available

S-EPMC4720167 | biostudies-literature

Rapid Analyses of Proteomes and Interactomes Using an Integrated Solid-Phase Extraction-Liquid Chromatography-MS/MS System.

Data from ProteomeXchange, PXD ID: PXD001111. Experiment: NYLON_Hela, file: OR7_20130627_NB_Nylon_Hela_1ug_top20_1.mzml. Published as part of J Proteome Res. 2014 Dec 8 . From the Abstract: {{i}} Here, we explore applications of a LC system using disposable solid-phase extraction (SPE) cartridges a...

ORGANISM(S): Homo_sapiens_viruses, Human_female

GPM32310005326 | GPMDB

Resource Reanalysis