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TranscriptomicsTranscriptional analysis of wild-type and delta_dasR mutant of Streptomyces coelicolor grown in soil amended with chitin
Genome-wide microarray analysis was performed using RNA extracted from soil cultures of Streptomyces coelicolor A3(2) in the presence or absence of chitin. The vast majority of genes in chitin and amino sugar metabolism, as well as many other genes for carbon and energy, nitrogen and sulfur metaboli...
ORGANISM(S): Streptomyces coelicolor A3(2) 
2012-11-07 | E-GEOD-39164 | biostudies-arrayexpress
UnknownCryo-EM Structure of hERG Channel
Not available
EMPIAR-13731 | biostudies-other
TranscriptomicsTranscription profiling of Arabidopsis T87 cells with or without Myb28 over-expression
Comparison of Arabidopsis T87 cells transformed with an empty vector vs transcription factor (TF)-overexpressed lines of T87 cells.
ORGANISM(S): Arabidopsis thaliana 
2007-03-15 | E-ATMX-8 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of Arabidopsis wild type and MYB knock out plants
Comparing the gene expression patterns between wild type plant (Col-0) and MYB knock-out plants.
ORGANISM(S): Arabidopsis thaliana 
2007-03-14 | E-ATMX-6 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of A. thaliana Col-0 wild-type vs. MYB overexpression plants
Comparing the gene expression patterns between wild type plant (Col-0) and MYB Over-expression plants.
ORGANISM(S): Arabidopsis thaliana 
2007-03-14 | E-ATMX-7 | biostudies-arrayexpress
ProteomicsProteomic analysis of lung tissues in an oleic acid (OA)-induced acute lung injury model rats
Data analyzed proteins extracted from lung tissue samples from OA-induced acute lung injury model rats. Samples were collected at 0 (pretreatment), 3, 6, 24, 48, 96 h after OA administration. Whole tissue extracts were prepared from three individuals and analyzed using the DIA-MS method.
ORGANISM(S): Cellular Organisms 
2025-03-14 | PXD057386 | JPOST Repository
ProteomicsRapid and Label-Free Structural Proteomics by One-Step Swift Trypsin LiP-MS
We developed a rapid, surface-targeted limited proteolysis workflow, Swift Trypsin LiP-MS (STLiP-MS), to profile proteome-wide structural changes under near-native conditions. STLiP-MS uses a trypsin-immobilized spin column and centrifugation-controlled contact to achieve instantaneous, highly repro...
ORGANISM(S): Homo Sapiens (human) Cellular Organisms 
2026-01-05 | PXD069771 | JPOST Repository
ProteomicsAssessing Native-Liver Post-Kasai Portoenterostomy for biliary atresia through Stool Proteome Analysis
In this prospective study, we analyzed stool proteomes from four patients with well-controlled conditions, four patients with recurrent cholangitis, and three patients with prolonged jaundice but no cholangitis, all of whom had undergone Kasai portoenterostomy for biliary atresia (BA). The study als...
ORGANISM(S): Homo Sapiens (human) 
2025-09-04 | PXD055756 | JPOST Repository
ProteomicsProteome analysis of brainstem organoids from human pluripotent stem cells
Brain organoids derived from human pluripotent stem cells recapitulate the course of human brain development. We applied proteomic analysis to human brainstem organoids which were developed by a novel method.
ORGANISM(S): Homo Sapiens (human) 
2020-05-01 | PXD016807 | JPOST Repository
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