Sample multiplexing

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UNIPROT ID/AC

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A0A0P0V1X3_ORYSJ (2)
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A0A0P0V994_ORYSJ (2)
A0A0P0VEP5_ORYSJ (2)
A0A0P0VH79_ORYSJ (2)
A0A0P0VLJ4_ORYSJ (2)
A0A0P0VNU0_ORYSJ (2)
A0A0P0VQM8_ORYSJ (2)

ENSEMBL ID

ENSG00000170477 (10)
ENSG00000229353 (10)

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Classification

bacteria (1)

Modification

4x(15)N labeled L-arginine (1)

Study type

RNA-seq of coding RNA (250)
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Other (20)
Methylation profiling by high throughput sequencing (20)
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Release Date

2015 (90)
2014 (72)
2013 (72)
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2006 (1)

Lab affiliation

Cellzome (6)
1VIB-UGent Center for Medical Biotechnology, VIB, 9052 Ghent, Belgium 2Department of Biomolecular Medicine, Ghent University, 9052 Ghent, Belgium (4)
Department of Cell Biology, Harvard Medical School, USA (4)
Department of Cell Biology Harvard Medical School Boston, MA 02115 (3)
Department of Cell Biology, Harvard Medical School, Boston, MA, USA (3)
Department of Laboratory Medicine and Pathology, Mayo Clinic (3)
Harvard medical school (3)
State Key Laboratory of Genetic Engineering, Department of Biochemistry and Biophysics, School of Life Sciences, Fudan University, Shanghai 200438, China (3)
Department of Biochemistry and Microbiology, Ghent University, Belgium (2)
Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California (2)
Department of Cell Biology Harvard Medical School Boston, MA, USA (2)
Department of Cell Biology, Harvard Medical School (2)
Harvard Medical School (2)
Harvard Medical School Department of Cell Biology Harvard Medical School Boston, MA, USA (2)
Max Planck Institute of Biochemistry (2)
Princeton University (2)
The University of Sydney (2)
University of Manchester (2)
VIB-UGent Center for Medical Biotechnology UGent Department of Biomolecular Medicine Technologiepark-Zwijnaarde 75 B9052 Gent Belgium (2)
1 Division of Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17 177 Stockholm, Sweden 2 Chemical Proteomics Unit, Science for Life Laboratory (SciLifeLab), SE-17 177 Stockholm, Sweden 3 Chemical Proteomics, Swedish National Infrastructure for Biological Mass Spectrometry (BioMS), SE-17 177 Stockholm, Sweden (1)
1Medical Research Council Metabolic Diseases Unit, Institute of Metabolic Science-Metabolic Research Laboratories, University of Cambridge, Cambridge, United Kingdom (1)
1VIB Center for Medical Biotechnology (CMB), Ghent, 2Belgium Department of Biomolecular Medicine, Ghent University, Ghent, Belgium, 3Cancer Research Institute Ghent (CRIG), Ghent, Belgium. (1)
Assistant Professor, Department of Biochemistry and Molecular Biotechnology (1)
Associate Professor, Department of Chemistry, Vanderbilt University (1)
Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland, 4072 St. Lucia, Australia. (1)
Baker Institute (1)
Bavarian Center for Biomolecular Mass Spectrometry at Klinikum rechts der Isar - Technical University of Munich (1)
Bielefeld University (1)
Biology Department, University of Rochester (1)
Biozentrum, Universtiy of Basel, 4056 Basel, Switzerland (1)

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Enhanced sample multiplexing-based targeted proteomics with intelligent data acquisition

Targeted proteomics has been playing an increasingly important role in hypothesis-driven protein research and clinical bi-omarker discovery. We have previously created a workflow, Tomahto, to enable real-time targeted pathway proteomics assays using two-dimensional multiplexing technology. Coupled w...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2024-08-14 | MSV000095604 | MassIVE

Sample multiplexing for retinal single-cell RNA-sequencing

PRJNA1071096 | ENA

Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression

Targeted proteomics enables hypothesis-driven research by measuring the cellular expression of protein cohorts related by function, disease, or class after perturbation. Here, we present a pathway-centric approach and an assay builder resource for targeting entire pathways of proteins selected from ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090)

2022-08-11 | MSV000090110 | MassIVE

Sample multiplexing for retinal single-cell RNA-sequencing

Single cell RNA sequencing (ScRNA-seq) often requires sample pooling, but sample variance is rarely addressed. We perform scRNA-seq on retinal ganglion cells with retina-multiplexing to assess the whether this enables comparisons between retinas of an experiment.

ORGANISM(S): Mus musculus

2024-06-12 | GSE254587 | GEO

CellTag Indexing: genetic barcode-based sample multiplexing for single-cell genomics

PRJNA533780 | ENA

Profiling Yeast Deletion Strains using Sample Multiplexing and Network-based Analyses

The yeast, Saccharomyces cerevisiae, is a widely used model system for investigating conserved biological functions and pathways. Advancements in sample multiplexing have facilitated the study of the yeast proteome, yet many yeast proteins remain uncharacterized or only partially characterized. The ...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2022-09-02 | PXD032042 | Pride

Sample multiplexing for joint RNA-ATAC multiomic profiling using MULTI-seq

PRJNA1465160 | ENA

Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression

Targeted proteomics plays a specialized role in hypothesis-driven research where the expression of cohorts of dozens of proteins related by function, disease, co-expression, localization, or class are measured after perturbing a pathway. Moreover, a major advance in proteomics is the ability to comb...

ORGANISM(S): Mus musculus (Mouse)

2023-03-11 | PXD029461 | Pride

Sample multiplexing Mouse proteome Tmt Targeted proteomics

Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression

ORGANISM(S): Mus musculus (Mouse)

2023-03-11 | PXD033679 | Pride

Sample multiplexing Mouse proteome Tmt Targeted proteomics

Sample multiplexing-based targeted pathway proteomics with real-time analytics reveals the impact of genetic variation on protein expression

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD033643 | Pride

Sample multiplexing Mouse proteome Tmt Targeted proteomics

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1405 Results

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