Sasaki S S - OmicsDI

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Unknown (2899)
Transcriptomics (62)
Proteomics (35)
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Homo sapiens (38)
Mus musculus (35)
Arabidopsis thaliana (7)
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Caenorhabditis elegans (2)
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Oryza sativa Japonica Group (1)
Methanococcus maripaludis (1)
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Organisms

Nicotiana tabacum (1)
Macaca mulatta (1)
Homo sapiens (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (67)
pride (26)
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geo (3)
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Disease

Acute leukemia (3)
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Disease free (1)
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Technology Type

Mass Spectrometry (26)
Shotgun proteomics (12)
Bottom-up proteomics (8)
Mass spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (3)
NMR spectroscopy (2)
Data-dependent acquisition (2)
SWATH MS (2)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - alternating - hilic (2)
Nuclear Magnetic Resonance (NMR) - (2)
Illumina Genome Analyzer IIx (1)
Scanning hardware (1)
Illumina HiSeq 2000 (1)
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LTQ (1)
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Publication Date

2013 (11)
2010 (11)
2012 (10)
2015 (9)
2026 (9)
2024 (8)
2014 (7)
2008 (6)
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2011 (4)
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2007 (3)
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2018 (1)
2019 (1)
2017 (1)

CHEBI ID

CHEBI:30769 (4)
CHEBI:32816 (4)
CHEBI:6650 (4)
CHEBI:15741 (3)
CHEBI:18012 (3)
CHEBI:26271 (3)
CHEBI:27266 (3)
CHEBI:27897 (3)
CHEBI:28300 (3)
CHEBI:30915 (3)
CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:15603 (2)
CHEBI:15729 (2)
CHEBI:15971 (2)
CHEBI:16349 (2)
CHEBI:16467 (2)
CHEBI:16643 (2)
CHEBI:16857 (2)
CHEBI:16977 (2)
CHEBI:17050 (2)
CHEBI:17115 (2)
CHEBI:17191 (2)
CHEBI:17196 (2)
CHEBI:17295 (2)
CHEBI:17895 (2)
CHEBI:17925 (2)
CHEBI:18019 (2)
CHEBI:22660 (2)
CHEBI:29988 (2)

Metabolite Name

Alpha-ketoglutarate (2)
Dihydroxyacetone phosphate (2)
Fumarate (2)
Malate (2)
Pyruvate (2)
Succinic acid (2)
1,6-Anhydroglucose (1)
1-Hexadecanol (1)
2'-Deoxyuridine (1)
2,3-Bisphosphoglyceric acid (1)
2-Aminoadipic acid (1)
2-Aminobutyric acid (1)
2-Aminoethanol (1)
2-Aminoisobutyric acid (1)
2-Aminooctanoic acid (1)
2-Aminopimelic acid (1)
2-Hydroxybutyric acid (1)
2-Hydroxyglutaric acid (1)
2-Hydroxyisobutyric acid (1)
2-Hydroxyisocaproic acid (1)
2-Hydroxyisovaleric acid (1)
2-Isopropylmalic acid (1)
2-Ketoadipic acid (1)
2-Ketobutyric acid (1)
2-Ketoglutaric acid (1)
2-Methyl-3-hydroxybutyric acid (1)
2-Methylhippuric acid (1)
2-Phosphoglyceric acid (1)
3,4-Dihydroxybenzylamine (1)
3-Aminoglutaric acid (1)

First Public Date

2014 (2)
2017 (1)
2015 (1)

Study type

Transcription profiling by array (42)
RNA-seq of coding RNA (5)
ChIP-seq (4)
Comparative genomic hybridization by array (3)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (2)
Methylation profiling by array (2)
RNA-seq of non coding RNA (2)
Other (1)
MicroRNA profiling by array (1)
Proteomic profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (341)
2025 (317)
2021 (313)
2023 (286)
2024 (275)
2020 (260)
2018 (181)
2019 (178)
2015 (123)
2017 (119)
2016 (115)
2014 (85)
2013 (60)
2012 (55)
2026 (52)
2010 (42)
2011 (40)
2009 (25)
2008 (25)
2007 (14)
2006 (13)
2005 (10)
2004 (8)
2001 (7)
2000 (6)
2003 (5)
1999 (4)
2002 (3)
1998 (2)
1997 (1)

Lab affiliation

Department of Leukemia, Division of Cancer Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX (4)
Department of Nephrology, Tokyo Medical and Dental University (TMDU), Tokyo 113-8510, Japan (2)
Leukemia Department, MD Anderson Cancer Center, Houston, TX 77030 (2)
The University of Melbourne (2)
Washington University in St. Louis School of Medicine (2)
Babraham Institute, UK (1)
Bavarian Center for Biomolecular Mass Spectrometry at Klinikum rechts der Isar Technical University of Munich (1)
Brigham and Women's Hospital, Harvard Medical School (1)
Cedars-Sinai Medical Center (1)
Centre for Drug Safety Science, Dept Pharmacology and Therapeutics, Institute for Systems, Molecular and Integrative Biology, University of Liverpool (1)
Centre for Drug Safety Science, Dept Pharmacology and Therapeutics, Institute of Systems, Molecular and Integrative Biology, University of Liverpool (1)
Chair of chromatin replication and architecture, Institute of Cell Biology, University of Edinburgh, School of Biological Sciences Kings Buildings Roger Land Building, room 1.63 Alexander Crum Brown Road Edinburgh EH9 3FF, UK (1)
Department of Environmental Medicine and Molecular Toxicology, Tohoku University Graduate School of Medicine, Sendai 980-8575, Japan. (1)
Graduate School of Pharmaceutical Sciences, Tohoku University (1)
Laboratory of Clinical Pharmaceutical Science, Kobe Pharmaceutical University, Japan (1)
Molecular Cell and Developmental Biology, School of Life Sciences, University of Dundee (1)
Molecular Profiling Research Center for Drug Discovery, National Institute of Advanced Industrial Science and Technology (AIST), Japan (1)
Proteomics Head, British Columbia Cancer Agency, Vancouver, Canada (1)
University of Southern California (1)

Tags

xref:PubMed:17761750 (1)
xref:PubMed:15897466 (1)

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Response of tobacco cells to Glucan elicitor

We have previously reported that the responses of tobacco tissues treated with AaGlucan are similar to those for laminarin [1]. To better understand the overall responses and signaling pathways in tobacco, we have identified here AaGlucan and laminarin early response genes, using a custom 16K BY-2 m...

ORGANISM(S): Nicotiana tabacum

2007-10-16 | E-GEOD-6948 | biostudies-arrayexpress

Whole-genome nucleosome mapping in meiotic diploid S. cerevisiae

We determined nucleosome positions throughout the genome in diploid S. cerevisiae undergoing early stages of synchronous meiosis. This study sought to assess if systematic reorganization of nucleosomes occurs during meiotic prophase at or near sites of DNA double strand break formation. Six samples ...

ORGANISM(S): Saccharomyces cerevisiae

2011-03-07 | E-GEOD-26452 | biostudies-arrayexpress

Characterization of virulence profile, protein secretion and immunogenicity of different Sporothrix schenckii sensu stricto isolates compared with S. globosa and S. brasiliensis species.

Not available

S-EPMC3711982 | biostudies-literature

Randomised phase II study of S-1/cisplatin plus TSU-68 vs S-1/cisplatin in patients with advanced gastric cancer.

Not available

S-EPMC3798959 | biostudies-literature

Genomic structure of the cyanobacterium Synechocystis sp. PCC 6803 strain GT-S.

Not available

S-EPMC3190959 | biostudies-literature

Plasma pharmacokinetics and synovial concentrations of S-flurbiprofen plaster in humans.

Not available

S-EPMC4701782 | biostudies-literature

Synthesis of Poly(olefin sulfone)s That Release Low-Molecular-Weight Bases by Light Absorption and Investigation of Their Photoinduced Depolymerization.

Not available

S-EPMC12223898 | biostudies-literature

p53 ensures the normal behavior and modification of G1/S-specific histone H3.1 in the nucleus.

Not available

S-EPMC11192845 | biostudies-literature

Transcriptional profiling of a genome-reduced strain in Schizosaccharomyces pombe

Gene number of the fission yeast Schizosaccharomyces pombe is the lowest in free-living eukaryotes. We further reduced the gene number to examine a minimal gene set required for growth. The genome-reduced strain, named ASP3894, has four chromosomal deletion regions: 168.4 kb deletion in the left arm...

ORGANISM(S): Schizosaccharomyces pombe

2013-05-01 | E-GEOD-38620 | biostudies-arrayexpress

Characterization of Enzymes Catalyzing Transformations of Cysteine S-Conjugated Intermediates in the Lincosamide Biosynthetic Pathway.

Not available

S-EPMC5253346 | biostudies-literature

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