Sato S S - OmicsDI

Show results for

Unknown (6698)
Transcriptomics (194)
Proteomics (91)
Genomics (29)
Metabolomics (27)
Models (3)
Genomic (1)

Organisms

Homo sapiens (123)
Mus musculus (97)
Oryza sativa Japonica Group (17)
Rattus norvegicus (16)
Arabidopsis thaliana (12)
Caenorhabditis elegans (5)
Gallus gallus (5)
cellular organisms (4)
Lotus japonicus (3)
Drosophila melanogaster (3)
Saccharomyces cerevisiae (3)
Rattus rattus (3)
Arabidopsis (2)
Aegilops tauschii (1)
Bombyx mori (1)
Daphnia pulex (1)
Macaca mulatta (1)
Entamoeba histolytica (1)
Medicago truncatula (1)
Anaerostipes caccae (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Bacteroides thetaiotaomicron (1)
Bifidobacterium longum subsp. longum (1)
Blautia producta ATCC 27340 = DSM 2950 (1)
Canis lupus familiaris (1)
Clostridium butyricum DSM 10702 (1)
Escherichia coli str. K-12 substr. MG1655 (1)
Lactiplantibacillus plantarum subsp. plantarum (1)
Thomasclavelia ramosa DSM 1402 (1)
Xenopus laevis (1)

Organisms

Homo sapiens (2)
Aegilops tauschii (1)
unidentified (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Rattus norvegicus (1)

Repository

biostudies-arrayexpress (203)
jPOST (52)
pride (33)
MetaboLights (27)
EGA (12)
ENA (7)
MassIVE (6)
BioModels (3)
dbGaP (1)
geo (1)

Tissue

Cell culture (10)
Blood plasma (4)
Brain (2)
Epithelial cell (2)
Liver (2)
B cell (1)
B-lymphoma cell line (1)
Bone marrow (1)
Brown preadipocyte (1)
Cell line cell (1)
Colon (1)
Dendritic cell (1)
Egg (1)
Embryonic stem cell (1)
Erythrocyte (1)
Fibroblast (1)
Gastrocnemius (1)
Heart (1)
Intestinal wall (1)
J-774 cell (1)
Macrophage (1)
Macrophage cell line (1)
Neuron (1)
Peyers gland (1)
Plant cell (1)
T-helper 1 cell (1)
T-helper 2 cell (1)
Th1-cell (1)
Th2-cell (1)
WEHI-231 cell (1)

Disease

Colon cancer (2)
Disease free (2)
Normal (1)
Arrhythmogenic right ventricular cardiomyopathy (1)
Bacterial sepsis (1)
Lymphoma (1)
Sickle cell anemia (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (33)
Mass spectrometry (24)
Bottom-up proteomics (11)
Shotgun proteomics (11)
Gel-based experiment (5)
Data-dependent acquisition (4)
NMR spectroscopy (3)
Affinity purification coupled with mass spectrometry proteomics (2)
SWATH MS (2)
Affymetrix_250K(Nsp) - gtype (1)
Illumina HiSeq 2000, Infinium HumanMethylation450 BeadChip (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2500, ILLUMINA (1)
Mass spectrometry assay (1)
Affinity proteomics (1)
Data-independent acquisition (1)
Mass spectrometry imaging (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (9)
Illumina NovaSeq 6000 (7)
NextSeq 500 (7)
Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - negative - hilic (4)
Liquid Chromatography MS - positive - hilic (4)
Illumina HiSeq 2500 (3)
Capillary electrophoresis MS - negative (3)
Capillary electrophoresis MS - positive (3)
Q Exactive (2)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - alternating (2)
Liquid Chromatography MS - alternating - hilic (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Nuclear Magnetic Resonance (NMR) - (2)
Microcentrifuge (1)
ScanArray scanning hardware (1)
Illumina Genome Analyzer IIx (1)
Illumina MiSeq (1)
LTQ (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion Lumos (1)
Q Exactive Plus (1)
Bruker (1)
Flow Injection Analysis MS - Positive (FIA-MS (Positive)) (1)
LTQ FT ULTRA (Thermo Scientific) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive (1)

Publication Date

2012 (37)
2014 (30)
2022 (27)
2015 (26)
2013 (26)
2023 (22)
2011 (18)
2016 (17)
2010 (17)
2021 (16)
2018 (16)
2024 (13)
2020 (12)
2026 (12)
2008 (11)
2019 (7)
2009 (6)
2025 (6)
2007 (2)
2017 (2)
2006 (1)
2004 (1)

UNIPROT ID/AC

Q940U6 (2)
Q9XFM0 (2)
O14974 (1)
O94810 (1)
P00734 (1)
P05976 (1)
P17252 (1)
P25116 (1)
P29992 (1)
P49677 (1)
P61586 (1)
P62158 (1)
P62873 (1)
P63211 (1)
Q03113 (1)
Q13464 (1)
Q14643 (1)
Q570C0 (1)
Q92888 (1)
Q96A00 (1)
Q9H1R3 (1)
Q9LPW7 (1)
Q9LW29 (1)
Q9NQ66 (1)
Q9NRY4 (1)
Q9ZR12 (1)

CHEBI ID

CHEBI:16335 (14)
CHEBI:16708 (12)
CHEBI:18237 (12)
CHEBI:26271 (12)
CHEBI:28044 (12)
CHEBI:16449 (11)
CHEBI:16919 (11)
CHEBI:17368 (11)
CHEBI:17822 (11)
CHEBI:17895 (11)
CHEBI:25017 (11)
CHEBI:27897 (11)
CHEBI:15428 (10)
CHEBI:16027 (10)
CHEBI:16737 (10)
CHEBI:16811 (10)
CHEBI:17509 (10)
CHEBI:17596 (10)
CHEBI:18257 (10)
CHEBI:22653 (10)
CHEBI:25094 (10)
CHEBI:27266 (10)
CHEBI:29016 (10)
CHEBI:15996 (1)
CHEBI:16595 (1)
CHEBI:17268 (1)
CHEBI:17552 (1)
CHEBI:18035 (1)
CHEBI:18348 (1)
CHEBI:29108 (1)

Metabolite Name

Adenosine (8)
Hypoxanthine (7)
Creatinine (6)
Inosine (6)
Ornithine (6)
Uracil (6)
Adenine (5)
Biotin (5)
Choline (5)
Creatine (5)
Cytidine (5)
L-Arginine (5)
Proline (5)
Thymidine (5)
Uric acid (5)
Xanthine (5)
2-Hydroxybutyrate (4)
3-Hydroxybutyrate (4)
AMP (4)
Alanine (4)
Benzaldehyde (4)
Cholic acid (4)
Citric acid (4)
Deoxyuridine (4)
Epinephrine (4)
FAD (4)
Gluconic acid (4)
Glucosamine 6-phosphate (4)
Guanine (4)
IDP (4)

First Public Date

2023 (2)
2022 (2)
2014 (2)
2025 (1)

Modelling Approach

Ordinary differential equation model (3)

Lab affiliation

Biomolecular characterization unit, Center for Sustainable Resource Science, RIKEN (3)
Graduate School of Pharmaceutical Sciences, Tohoku University (2)
Shiga University of Medical Science (2)
Advanced Research Initiative, Institute of Integrated Research, Institute of Science Tokyo (1)
Associate Professor, Department of Biomedical Sciences,Affiliated with The Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen. (1)
Department of Metabolic Medicine, Faculuty of Life Sciences, Kumamoto University, 1-1-1 Honjo, Chuoku, Kumamoto 860-8556, Japan (1)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, Greifswald, Germany (1)
Department of Nanobiotechnology, Vision Research Foundation, Sankara Nethralaya, 18 College Road, Chennai, Tamil Nadu, 600 006, India. (1)
Department of Neurology, Washington University School of Medicine St Louis (1)
Division of Applied Life Science, Graduate School of Agriculture (1)
Division of Integrative Pathophysiology, Proteo-Science Center, PIAS, Ehime University, Japan (1)
Faculty of Science (1)
Gunma University Graduate School of Medicine, Japan (1)
Helmholtz-Centrte for Environmental Research - UFZ GmbH Department of Molecular Systems Biology Permoserstr. 15 04318 Leipzig, Germany (1)
Histone Modifications Group Zentrallabor für Proteinanalytik BioMedical Center Faculty of Medicine Ludwig-Maximilians-University of Munich Großhadernerstr. 9 82152 Planegg-Martinsried GERMANY (1)
Hoshi University, Japan (1)
Institut Of Human Genetics, CNRS, Univ. Montpellier, UMR 9002, France (1)
Laboratory for Biomarker Development (1)
Oncode Institute, Hubrecht Institute-KNAW & University Medical Center Utrecht, Uppsalalaan 8, Utrecht, 3584 CT, The Netherlands (1)
Professor of Biochemistry and Biophysics, University of Pennsylvania School of Medicine (1)
Professor of Molecular Biology. Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee ,Dundee, DD1 5EH, Scotland, UK (1)
Professor of Pharmaceutical Sciences & Moulder Center for Drug Discovery Professor Lewis Katz School of Medicine Member Fox Chase Cancer Institute Director of Proteomics/Metabolomics Temple University School of Pharmacy (1)
Professor of Pharmaceutical Sciences & Moulder Center for Drug Discovery Professor Lewis Katz School of Medicine Member Fox Chase Cancer Institute Director of Proteomics/Metabolomics Temple University School of Pharmacy 3307 N Broad Street Room 552 Philadelphia, PA 19140 Tel: 215 707 9228 (1)
RIKEN RCAI (1)
The Univesity of Tokyo (1)
Tokyo University of Pharmacy and Life Sciences (1)
University of Southern Denmark, Department of Biochemistry and Molecular Biology, Campusvej 55, 5230 Odense M, Denmark (1)
University of Texas Health San Antonio (1)
kochi university (1)