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ProteomicsSystems-wide analysis of BCR signalosomes and downstream phosphorylation and ubiquitylation
In this study, we have analyzed BCR induced dynamic composition of the BCR signalosome and global changes in BCR induced phosphoproteome and ubiquitylation events using high resolution LC-MS/MS
ORGANISM(S): Mus musculus (Mouse) 
2015-06-02 | PXD001440 | Pride
B-cells Bcr signaling A20 b cell line 
UnknownHigh-Throughput Proteomic and Phosphoproteomic Analysis of Formalin-Fixed Paraffin-Embedded Tissues.
Not available
S-EPMC12450643 | biostudies-literature
UnknownMicroscaled Cell Surface Proteomics for Cryo-Preserved Cells and Tissue Samples.
Not available
S-EPMC12702325 | biostudies-literature
ProteomicsMicroscaled Proteogenomic Methods for Precision Oncology

Shankha Satpathy, Eric J. Jaehnig, et al., Nature Communications volume 11, Article number: 532 (2020)

Cancer proteogenomics promises new insights into cancer biology and treatment efficacy by integrating genom...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2021-06-02 | MSV000087566 | MassIVE
ProteomicsProteogenomic Landscape Of Breast Cancer Tumorigenesis And Targeted Therapy
Karsten Krug, Eric J. Jaehnig, Shankha Satpathy, Lili Blumenberg, Alla Karpova, Meenakshi Anurag et al., (2020) Cell, 183, 1436-1456
DOI: https://doi.org/10.1016/j.cell.2020.10.036

The integration of ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-06-05 | MSV000087576 | MassIVE
ProteomicsTime-resolved analysis reveals rapid dynamics and broad scope of the CBP/p300 acetylome
The acetyltransferases CBP and p300 are multifunctional transcriptional co-activators; however, their acetylation targets, site-specific acetylation kinetics, and function in proteome regulation are incompletely understood. We combined quantitative proteomics with novel CBP/p300-specific catalytic i...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
MSV000095981 | MassIVE
UnknownMicroscaled proteogenomic methods for precision oncology.
Not available
S-EPMC6985126 | biostudies-literature
UnknownProteogenomic analysis of the CALGB 40601 (Alliance) HER2+ breast cancer neoadjuvant trial reveals resistance biomarkers.
Not available
S-EPMC12208316 | biostudies-literature
ProteomicsHighly multiplexed quantitative phosphosite assay for biology and preclinical studies
Reliable methods to quantify dynamic signaling changes across diverse pathways are needed to better understand the effects of disease and drug treatment in cells and tissues but are presently lacking. Here we present SigPath, a targeted mass spectrometry (MS) assay that measures 284 phosphosites in ...
ORGANISM(S): Homo Sapiens 
2021-10-08 | PXD026939 | panorama
UnknownA proteogenomic portrait of lung squamous cell carcinoma.
Not available
S-EPMC8475722 | biostudies-literature
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