Scavenger cells

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Unknown (1775)
Transcriptomics (232)
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Proteomics (45)
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Organisms

Homo sapiens (120)
Mus musculus (96)
Aerococcus urinae NBRC 15544 = CCUG 36881 (32)
Andropogon gerardi (32)
Bacteria (32)
Bartonella quintana JK 31 (32)
Canis lupus familiaris (32)
Cnidaria (32)
Ectopseudomonas oleovorans CECT 5344 (32)
Ensifer adhaerens (32)
Halictus scabiosae (32)
Rattus norvegicus (15)
Thermus thermophilus HB8 (4)
Drosophila melanogaster (4)
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Caenorhabditis elegans (3)
Danio rerio (3)
Sus scrofa (2)
Bacillus cereus ATCC 10987 (2)
Saccharomyces cerevisiae (2)
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Magnetospirillum gryphiswaldense (1)
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Mus (1)

Organisms

Mus musculus (65)
Homo sapiens (58)
Rattus norvegicus (5)
Caenorhabditis elegans (2)
Danio rerio (2)
Psychrobacter raelei (1)
Bacillus cereus ATCC 10987 (1)
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Arabidopsis thaliana (1)

Repository

ENA (161)
biostudies-arrayexpress (132)
geo (121)
pride (32)
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Tissue

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Endothelial cell of hepatic sinusoid (1)
Endothelial cell of sinusoid (1)
Hippocampal neuron (1)
Kupffer cell (1)
Lung (1)
Peritoneal fluid (1)
Permanent cell line cell (1)
Primary cell (1)
Yolk sac (1)

Disease

Normal (1)
Colorectal Neoplasms (1)
Alzheimer's disease (1)
Colon cancer (1)
Disease free (1)
Fanconi-like syndrome (1)
Melanoma (1)
Stomach cancer (1)
Tuberculosis (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (32)
Shotgun proteomics (17)
Bottom-up proteomics (9)
Mass spectrometry (4)
Affinity purification coupled with mass spectrometry proteomics (4)
Data-dependent acquisition (4)
Gel-based experiment (3)
Data-independent acquisition (2)
ILLUMINA, NextSeq 500 (1)
Mass spectrometry assay (1)
SWATH MS (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Illumina HiSeq 4000 (2)
NextSeq 500 (2)
Q Exactive Plus (2)
Gas Chromatography MS - positive (2)
Thermal cycler; magnetic separation rack; Qubit Fluorometer; Agilent TapeStation 4200 (1)
Microcentrifuge; magnetic separation rack; Qubit Flu/spectrophotometer; Agilent TapeStation 4200 (1)
Incubator shaker; spectrophotometer; Cmag measurement system; flow cytometer (1)
Element AVITI (1)
Axon GenePix 4000B scanning hardware (1)
NextSeq 2000 (1)
Illumina HiSeq 1500 (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap XL (1)
Orbitrap Fusion ETD (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
TimsTOF Pro (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Q Exactive (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (37)
2024 (25)
2011 (25)
2010 (25)
2023 (17)
2022 (17)
2009 (16)
2026 (15)
2019 (14)
2013 (14)
2008 (14)
2014 (13)
2012 (13)
2021 (11)
2015 (10)
2016 (9)
2007 (8)
2020 (8)
2018 (4)
2017 (3)
2006 (2)
2005 (2)

CHEBI ID

CHEBI:16708 (2)
CHEBI:26806 (2)
CHEBI:17050 (2)
CHEBI:6650 (2)
CHEBI:15318 (2)
CHEBI:17568 (2)
CHEBI:16235 (2)
CHEBI:17084 (2)
CHEBI:17368 (2)
CHEBI:30769 (2)
CHEBI:229503 (1)
CHEBI:229499 (1)
CHEBI:229498 (1)
CHEBI:229497 (1)
CHEBI:229493 (1)
CHEBI:229500 (1)
CHEBI:229494 (1)
CHEBI:229501 (1)
CHEBI:229502 (1)
CHEBI:229495 (1)
CHEBI:199577 (1)
CHEBI:229496 (1)
CHEBI:58027 (1)
CHEBI:580387 (1)
CHEBI:57865 (1)
CHEBI:60377 (1)
CHEBI:58477 (1)
CHEBI:456215 (1)
CHEBI:29988 (1)
CHEBI:29993 (1)

Metabolite Name

3-phosphoglycerate (2)
NAD+ (2)
AMP (2)
L-Alanine (2)
Uracil (2)
CMP (2)
UMP (2)
L-Proline (2)
L-Glutamine (2)
Adenine (2)
Xanthine (2)
L-Leucine (2)
L-Tyrosine (2)
Hypoxanthine (2)
D-Lac-Hcy (1)
D-Lac-Gln (1)
D-Lac-Phe (1)
D-Lac-Thr (1)
D-Lac-Leu (1)
D-Lac-Met (1)
D-Lac-Glu (1)
D-Lac-Val (1)
MG-H1 (1)
L-Lac-Cys (1)
D-Lac-Cys peak 2 (1)
D-Lac-Cys peak 1 (1)
11-Deoxytetrahydrocortisol (1)
D-Threo-Isocitric Acid (1)
(2s,3s)-3-Hydroxypyrrolidine-2-Carboxylic Acid (1)
Methyl Glycinate (1)

First Public Date

2025 (30)
2024 (27)
2014 (24)
2023 (17)
2022 (14)
2026 (12)
2021 (9)
2019 (9)
2020 (6)
2013 (6)
2018 (3)
2016 (3)
2015 (1)

Classification

bacteria (1)

Study status

Active, not recruiting (1)

Study type

Transcription profiling by array (99)
RNA-seq of coding RNA (11)
Other (6)
ChIP-seq (4)
Unknown experiment type (2)
RNA-seq of coding RNA from single cells (2)
Transcription profiling by SAGE (1)
Cell line - One-color microarray (1)
ChIP-chip by array (1)
Transcription profiling by RT-PCR (1)
MicroRNA profiling by high throughput sequencing (1)
MicroRNA profiling by array (1)
RNA-seq of non coding RNA (1)
Interventional (1)

Release Date

2022 (196)
2021 (166)
2020 (147)
2023 (136)
2018 (132)
2025 (125)
2024 (121)
2017 (117)
2016 (103)
2019 (98)
2015 (98)
2014 (88)
2013 (70)
2010 (59)
2012 (58)
2011 (58)
2009 (39)
2008 (27)
2007 (23)
2026 (11)
2006 (10)
2005 (9)
2002 (6)
2004 (3)
1999 (3)
2000 (2)
2003 (1)
2001 (1)

Lab affiliation

Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg,CNRS, IPHC UMR 7178, 67087 Strasbourg,France (3)
Aarhus University Department of Biomedicine DK-8000C Aarhus Denmark (1)
Archaea Ecology and Evolution, Department of Functional and Evolutionary Ecology, University of Vienna (1)
CECAD and Institute for Genetics Joseph-Stelzmann Straße 26 University of Cologne, Cologne, Germany (1)
CSIR-Institute of Genomics and Integrative Biology (1)
Centro de Biología Molecular "Severo Ochoa" Universidad Autónoma de Madrid, 28049 Madrid, SPAIN (1)
Department of Biochemistry, Microbiology and Immunology Institute of Systems Biology University of Ottawa (1)
Department of Biology, University of Rome Tor Vergata, Rome, Italy (1)
Department of Medical Biology, Faculty of Health Sciences, UiT The Arctic University of Norway, Tromsø, Norway (1)
Department of Medical Biotechnology, Faculty of Biochemistry Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387 Krakow, Poland (1)
Department of Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology, Hans Knöll Institute Jena, Leibniz-HKI, Adolf-Reichwein-Str. 23, 07745 Jena, Germany (1)
Department of Molecular and Cellular Hemostasis, Sanquin Research, Amsterdam, the Netherlands; 3Department of Biomolecular Mass Spectrometry and Proteomics, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Utrecht, The Netherlands (1)
Guangzhou Eighth People’s Hospital Guangzhou Medical University, Guangzhou, China. (1)
Institute of Anatomy Christian-Albrechts-University Kiel, Kiel, Germany (1)
Institute of Medical Biology, Faculty of Health, UiT/The Arctic University of Norway (1)
Institute of Molecular Biology (IMB) Ackermannweg 4 (1)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg, CNRS, IPHC UMR 7178, 67087 Strasbourg, France (1)
Laboratoire de Spectrométrie de Masse BioOrganique (LSMBO), Université de Strasbourg,CNRS, IPHC UMR 7178, 67087 Strasbourg, France (1)
Mork Family Dept. of Chemical Engineering and Material Science, Associate Prof. (1)
NICM HRI, Western Sydney University, NSW, Australia (1)
Physiology & Pharmacology, Cumming School of Medicine, University of calgary, Cagary (1)
Principal Scientist, Immunophysiology Laboratory, Animal Physiology Division, ICAR- National Dairy Research Institute, Karnal- 132001, Haryana, India (1)
Professor of Biochemistry, Adjunct & Emerita Faculty N.T. Veatch Awardee for Distinguished Research & Creativity UMKC School of Science& Engineering, Biological & Biomedical Systems, Kansas City, MO, USA (1)
Proteome Research (AG Stühler) Institute of Molecular Medicine I Heinrich Heine University Düsseldorf Germany (1)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (1)
Qingdao University,China (1)
School of Biological Sciences Nanyang Technological University 60 Nanyang Drive, Singapore 637551 (1)
University of Milan, DISFARM (1)
University of Vermont, Department of Pathology and Laboratory Medicine (1)
University of Vienna, Faculty of Chemistry, Joint Metabolome Facility, Department of Analytical Chemistry (1)

Location

Italy (1)

Keyword

Lycopene (1)
Anti EGFR therapy (1)

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Isotope Labeled Reactivity-Based Metabolomics Reveal Cysteine as a Potent In Vivo Scavenger of Lactoylglutathione

Metabolite adducts are increasingly being recognized as important intermediates in cellular metabolism and as circulating messengers. Methylglyoxal (MG) is a highly reactive metabolite involved in diabetes and aging, via formation of a wide variety of protein adducts. Though new types of protein ...

2025-04-29 | MTBLS6287 | MetaboLights

Characterization of the scavenger cell proteome in mouse and rat liver

The structural-functional organization of ammonia and glutamine metabolism in the liver acinus involves highly specialized hepatocyte subpopulations such as glutamine producing perivenous scavenger cells. However, it is still unclear whether this cell population is homogeneous and involves further s...

ORGANISM(S): Mus musculus (Mouse) Rattus norvegicus (Rat)

2021-08-05 | PXD023561 | Pride

Analysis of Scavenger-Receptor Type H deficient liver sinusoidal endothelial cells

PRJNA663314 | ENA

Convergent evolution of scavenger cell development at vertebrate brain borders

PRJNA1126735 | ENA

Depletion of Canonical Histones Enhances Direct Reprogramming of Scavenger Cells in vivo

PRJNA1441351 | ENA

Scavenger Cells Failure to Maintain Systemic RNA Homeostasis Causes Epigenetically Inherited Germline Tumors

PRJNA1439220 | ENA

Transcription profiling of human monocyte-derived dendritic cells to study uptake of apoptotic cells by dendritic cells and induction of T-cell immunity

The identification of molecules for apoptotic cells (AC) uptake by dendritic cells (DCs) and induction of T cell immunity is a major challenge in immunology.
DCs generated from monocytes in the presence of IFN-alpha (IFN-alpha-DCs) are competent in taking up ACs and inducing a strong T cell immun...

ORGANISM(S): Homo sapiens

2010-01-08 | E-MEXP-2000 | biostudies-arrayexpress

Freshly isolated rat liver sinusoidal endothelial cells and Kupffer cells, LC-MSMS

Liver sinusoidal endothelial cells (LSECs) and Kupffer cells (KCs) have important roles in liver homeostasis and host defense. Sharing the same microenvironment in the liver sinusoid, they form an effective scavenger cell system for removal of potentially harmful blood-borne substances. Unlike most ...

ORGANISM(S): Rattus norvegicus (Rat)

2020-11-11 | PXD012080 | Pride

Liver cells Macrophage Rat Immunity Endothelium

Analysis of Scavenger-Receptor Type H deficient liver sinusoidal endothelial cells

Two of the most highly abundant transcripts in liver sinusoidal endothelial cells are Stab1 and Stab2, we investigated downstream effects on liver sinusoidal endothelial cells by disrupting their expression. We used microarrays to detail the global programme of gene expression in liver sinusoidal en...

ORGANISM(S): Mus musculus

2021-10-11 | GSE157900 | GEO

Scavenger receptor A ameliorates acetaminophen induced hepatic inflammation

PRJNA915955 | ENA

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2244 Results

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