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GenomicsPectobacterium carotovorum strain:SCC1
Pectobacterium carotovorum SCC1 genome sequencing
PRJNA379819 | ENA
TranscriptomicsRegulation of HB-EGF by miR-212 and acquired cetuximab-resistance in head and neck cancer
To determine the mechanism of cetuximab-resistance in head and neck cancer, a cetuximab-sensitive cell line (SCC1) and its cetuximab-resistant derivative (1Cc8) were analyzed for differentially expressed genes using DNA microarrays. 900 differentially expressed genes were found using the statistical...
ORGANISM(S): Homo sapiens 
2011-01-14 | E-GEOD-21483 | biostudies-arrayexpress
GenomicsMethanoculleus frigidifontis strain:FWC-SCC1
Methanoculleus frigidifontis strain:FWC-SCC1 Genome sequencing and assembly
PRJNA545194 | ENA
GenomicsRING1B calibrated ChIP-seq (cChIPseq) datasets for control mESCs and an Scc1-AID auxin-inducible degron.
We examined 3D chromatin structure in the absence of cohesin (Scc1-AID auxin-inducible degron) and a control line (E14-Tir1) and found that PRC1 core promoter component RING1B was one of the most enriched proteins. Hence, we performed calibrated ChIP-seq experiments on the control (E14-Tir1) and the...
ORGANISM(S): Mus musculus 
2020-01-23 | E-MTAB-7817 | biostudies-arrayexpress
TranscriptomicsCapture-C experiments on auxin treated control (E14-Tir) and Scc1-AID, Ring1b-AID, Ring1b-AID-Scc1-AID and CTCF-AID (with and without a 6-hour auxin treatment) cells
The aim of the experiment was to gain a higher resolution for specific regions of interest to complement the Hi-C results. Capture-C experiments were performed on four-inducible degrons for Scc1, Ringb, Ring1b-Scc1 and CTCF, and Tir1 control, always in triplicates (three biological replicates per co...
ORGANISM(S): Mus musculus 
2020-01-23 | E-MTAB-7840 | biostudies-arrayexpress
ProteomicsIdentification and functional characterization of proteins interacting with cohesin complex in yeast Saccharomyces cerevisiae.
To ensure equal separation of DNA, sister chromatids are held together from S phase to metaphase–anaphase transition by a multiprotein complex called cohesin. This makes it possible to establish chromosome biorientation, counteracts the pulling force of mitotic spindle microtubules, preventing prema...
ORGANISM(S): Danio rerio (Zebrafish) (Brachydanio rerio) Struthio camelus (Ostrich) Pisum sativum (Garden pea) Helicobacter pylori J99 (Campylobacter pylori J99) Mus musculus (Mouse) Olea europaea (Common olive) Pongo pygmaeus (Bornean orangutan) Dictyostelium discoideum (Slime mold) Sus scrofa domesticus (domestic pig) Merluccius bilinearis (Silver hake) Cicer arietinum (Chickpea) (Garbanzo) Candida albicans (Yeast) Rattus rattus (Black rat) Mesocricetus auratus (Golden hamster) Homo sapiens (Human) Gadus morhua (Atlantic cod) Brassica oleracea var. botrytis (Cauliflower) Halobacterium salinarum Hepatitis C virus subtype 1a Bombyx mori (Silk moth) Rattus norvegicus (Rat) Enterococcus faecalis (Streptococcus faecalis) Taeniopygia guttata (Zebra finch) (Poephila guttata) Pan troglodytes (Chimpanzee) Pinus radiata (Monterey pine) Cercopithecus aethiops (Green monkey) (Grivet) Nicotiana tabacum (Common tobacco) Hordeum vulgare (Barley) Heliocidaris erythrogramma (Sea urchin) Drosophila melanogaster (Fruit fly) Oryza sativa (Rice) Ictalurus punctatus (Channel catfish) Gallus gallus (Chicken) Caenorhabditis elegans Bos taurus (Bovine) Ricinus communis Solanum tuberosum (Potato) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) Brassica napus (Rape) Staphylococcus aureus Macaca mulatta (Rhesus macaque) Equus caballus (Horse) 
2023-10-24 | PXD037034 | Pride
Scc1 Cohesin complex Cohesion 
ProteomicsCrosslinking/mass spectrometry analysis of Human Separase-Scc1-fusion and cohesin SMC1/SMC3 complexes
In this study, we employed the photoactivatable crosslinker (sulfo-SDA) to investigate protein-protein interaction between human Separase-Scc1 fusion protein and SMC1/SMC3 cohesin subunits complex in the presence of DNA.
ORGANISM(S): Homo sapiens (Human) 
2025-08-28 | PXD061667 | Pride
Sulfo-sda Smc1 Smc3 Scc1 Separase Xlms 
GenomicsMapping the differential distribution of the cohesin subunit Scc1 in Trypanosoma brucei brucei.
Mapping the differential distribution of the cohesin subunit Scc1 in Trypanosoma brucei brucei.
PRJNA488057 | ENA
UnknownCrystal Structure of the Cohesin Gatekeeper Pds5 and in Complex with Kleisin Scc1.
Not available
S-EPMC4793087 | biostudies-literature
UnknownReleasing Activity Disengages Cohesin's Smc3/Scc1 Interface in a Process Blocked by Acetylation.
Not available
S-EPMC4769318 | biostudies-literature
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