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Proteomics (45)
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Homo sapiens (46)
Mus musculus (18)
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pride (42)
biostudies-arrayexpress (36)
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Mass Spectrometry (42)
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Liquid Chromatography MS - negative - reverse phase (3)
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UNIPROT ID/AC

O14744 (1)
O14980 (1)
O95149 (1)
P08621 (1)
P09012 (1)
P09234 (1)
P14678 (1)
P43487 (1)
P52292 (1)
P52297 (1)
P52298 (1)
P60510 (1)
P62304 (1)
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P62826 (1)
Q09161 (1)
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Q16637 (1)
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CHEBI ID

CHEBI:15428 (3)
CHEBI:18012 (3)
CHEBI:18183 (3)
CHEBI:28044 (3)
CHEBI:30769 (3)
CHEBI:33508 (3)
CHEBI:15741 (2)
CHEBI:15940 (2)
CHEBI:15956 (2)
CHEBI:15963 (2)
CHEBI:16199 (2)
CHEBI:16217 (2)
CHEBI:16335 (2)
CHEBI:16414 (2)
CHEBI:16449 (2)
CHEBI:16610 (2)
CHEBI:16643 (2)
CHEBI:16828 (2)
CHEBI:16857 (2)
CHEBI:17053 (2)
CHEBI:17115 (2)
CHEBI:17148 (2)
CHEBI:15422 (1)
CHEBI:16134 (1)
CHEBI:32484 (1)
CHEBI:37565 (1)
CHEBI:43474 (1)
CHEBI:58189 (1)
CHEBI:74035 (1)
CHEBI:84596 (1)

Metabolite Name

Fumaric acid (3)
Adenosine (2)
Citric acid (2)
D-Biotin (2)
Fructose (2)
Glyceric acid (2)
Glycine (2)
L-Norleucine (2)
Malic acid (2)
Nicotinic acid (2)
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Putrescine (2)
Ribitol (2)
Spermidine (2)
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Threonic acid (2)
Uracil (2)
Urea (2)
(+)-7-epi-Syringaresinol 4'-glucoside (1)
(+/-)-1-Acetoxy-1-ethoxyethane (1)
(-)-11-Hydroxy-9,15,16-trioxooctadecanoic acid (1)
(-)-Maackiain (1)
(1R,2R,4S)-p-Menthane-1,2,8-triol (1)
(1S,2S,4R,8R)-p-Menthane-1,2,9-triol (1)
(2'E,4'Z,7'Z,8E)-Colnelenic acid (1)
(2'E,4'Z,8E)-Colneleic acid (1)
(2E)-Decenoyl-ACP (1)
(2E,6Z)-2,6-Nonadien-1-Yl acetate (1)
(3beta,5alpha,6beta,22E,24R)-23-Methylergosta-7,22-diene-3,5,6-triol (1)
(4E)-1,7-bis(4-hydroxyphenyl)hept-4-en-3-one (1)

IsPrivate

False (2)

Modelling Approach

Ordinary differential equation model (1)
Petri net (1)

Study type

Transcription profiling by array (25)
ChIP-chip by array (4)
RNA-seq of coding RNA (4)
Comparative genomic hybridization by array (1)
Other (1)
ChIP-seq (1)

Release Date

2021 (87)
2022 (86)
2025 (85)
2023 (80)
2024 (68)
2019 (54)
2020 (51)
2018 (43)
2015 (31)
2016 (30)
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2008 (10)
2009 (9)
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2005 (1)

Lab affiliation

Institute of Molecular Biology and Biophysics, Department of Biology, ETH Zurich, Zurich, Switzerland Laboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, Villigen, Switzerland (3)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland (3)
Breast Cancer Now The Institute of Cancer Research (2)
ETH Zurich Institute of Molecular Systems Biology (2)
Faculty of Biology Technion - Israel Institute of Technology Haifa, Israel (2)
Faculty of Biology Technion Haifa 32000 Israel (2)
Institute of Molecular Biology and Biophysics, Department of Biology, ETH Zurich, Zurich, Switzerland; Laboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, Villigen, Switzerland (2)
., Department of Laboratory Medicine, Medical University of Vienna, 18-20 Währinger Gürtel, 1090 Vienna, Austria (1)
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany (1)
Biomolecular Mass Spectrometry & Proteomics, Bijvoet Center for Biomolecular Research & Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.; Netherlands Proteomics Center, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Breast Cancer Now Toby Robins Research Centre The Institute of Cancer Research London (1)
CeMM, Research Center for Molecular Medicine, Austrian Academy of Sciences, Austria (1)
Chair of Proteomics and Bioanalytics, TU Munich (1)
Dep. of Dermatology, Medical Center and Center for Biological Systems Analysis, University of Freiburg, Germany (1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, Zurich, 8093, Switzerland (1)
Department of Chemistry, Stanford University, Stanford, CA 94305; Sarafan ChEM-H, Stanford University, Stanford, CA 94305; Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305 (1)
Department of Chemistry, University of Kansas, Lawrence, KS, United States (1)
Department of Hematology and Oncology, University of Tübingen, Germany (1)
Department of Peptide-based Immunotherapy, University and University Hospital Tübingen, Tübingen, Germany (1)
Departments of Proteomics and Metabolomics Helmholtz Centre for environmental research - UFZ Permoserstrasse 15 04318 Leipzig Germany (1)
Inserm UMR_S1110 (1)
Institute of Molecular Systems Biology, ETH Zurich (1)
Karolinska Insitutet (1)
Laboratory of Biomolecular Research, Division of Biology and Chemistry, Paul Scherrer Institute, Villigen, Switzerland; Department of Biology, Institute of Molecular Biology and Biophysics, ETH Zurich, Switzerland (1)
Laboratory of Biomolecular Research, Paul Scherrer Institute, Villigen, Switzerland. Institute of Molecular Biology and Biophysics, ETH Zurich, Zurich, Switzerland (1)
Max planck institute of molecular plant physiology (1)
Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, D-14476 Potsdam-Golm, Germany (1)
Medical Bioanalytics Institute for Ophthalmic Research Eberhard-Karls-University Tuebingen (1)
Medical University of Vienna, Center for Anatomy and Cell Biology, Division for Cell and Developmental Biology, Vienna, Austria (1)
Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), 1030 Vienna, Austria (1)

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Divergent genome expression profiles during hepatic ischemia in young and adult mice

Experimental Design: 1. The goal of the experiment: Age-Related Genome Expression Profiles During Hepatic Ischemia 2. Brief description of the experiment: Hepatic ischemia/reperfusion (I/R) injury is a complication of liver surgery, transplantation and shock and differs with age. In the present stu...

ORGANISM(S): Mus musculus

2010-05-26 | E-GEOD-10652 | biostudies-arrayexpress

Age-dependent gene expression profiles after hepatic ischemia/reperfusion in mice

Experimental Design: 1. The goal of the experiment: Age-Dependent Gene Expression Profiles After Hepatic Ischemia/Reperfusion: Implications for the AP-1 and Ubiquitin-Proteosome Pathways 2. Brief description of the experiment: Hepatic ischemia/reperfusion (I/R) injury is a complication of liver surg...

ORGANISM(S): Mus musculus

2010-05-26 | E-GEOD-10654 | biostudies-arrayexpress

Systematic conservation prioritization with the prioritizr R package.

Not available

S-EPMC11780203 | biostudies-literature

Thermophilic Coenzyme B12-Dependent Acyl Coenzyme A (CoA) Mutase from Kyrpidia tusciae DSM 2912 Preferentially Catalyzes Isomerization of (R)-3-Hydroxybutyryl-CoA and 2-Hydroxyisobutyryl-CoA.

Not available

S-EPMC4551191 | biostudies-literature

The rnb gene of Synechocystis PCC6803 encodes a RNA hydrolase displaying RNase II and not RNase R enzymatic properties.

Not available

S-EPMC3293843 | biostudies-literature

Convergent construct validity and test-retest reliability of both German versions of the original and the revised Niigata PPPD Questionnaire: NPQ and NPQ-R.

Not available

S-EPMC11807810 | biostudies-literature

Highly Regioselective Synthesis of Oxindolyl-Pyrroles and Quinolines via a One-Pot, Sequential Meyer-Schuster Rearrangement, Anti-Michael Addition/C_(sp³)-H Functionalization, and Azacyclization.

Not available

S-EPMC6044873 | biostudies-literature

MutSeqR: an open source R package for standardized analysis of error-corrected next-generation sequencing data in genetic toxicology.

Not available

S-EPMC12645840 | biostudies-literature

Structural basis of calmodulin modulation of the rod cyclic nucleotide-gated channel (LiP-MS)

The aim of the project was to characterize structural changes that occur on the rod cyclic nucleotide-gated channel upon interaction with calmodulin (CaM) directly in the native membrane.

ORGANISM(S): Bos taurus (Bovine)

2023-04-06 | PXD038768 | Pride

chico mutant

Comparison of wild type and heterozygote and homozygote chico mutants ( Clancy, et al. Extension of Life-Span by Loss of CHICO, a Drosophila Insulin Receptor Substrate Protein. Science 292 (5514), 104.) on Affymetrix Drosophila2 GeneChip. The flies (Drosophila melanogaster) are 7 day old adult fema...

ORGANISM(S): Drosophila melanogaster

2007-06-06 | E-MEXP-1099 | biostudies-arrayexpress

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