Sea-ice - OmicsDI

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Unknown (1424)
Transcriptomics (435)
Genomics (388)
Proteomics (44)
Metabolomics (19)
Other (1)

Organisms

Mus musculus (246)
Homo sapiens (44)
Gallus gallus (7)
Ciona intestinalis (6)
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Saccharomyces cerevisiae (5)
Rattus norvegicus (5)
Danio rerio (5)
Arabidopsis thaliana (4)
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Dicentrarchus labrax (3)
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Fragilariopsis cylindrus (3)
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marine metagenome (2)
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Holothuria arguinensis (1)

Organisms

ice metagenome (137)
brine metagenome (22)
marine metagenome (12)
seawater metagenome (7)
marine plankton metagenome (3)
marine sediment metagenome (3)
marine eukaryotic metagenome (2)
algae metagenome (2)
Colwellia sp. SLW05 (1)
eukaryotic picoplankton environmental sample (1)
Flavobacterium frigoris PS1 (1)
Psychroflexus torquis ATCC 700755 (1)
Colwellia sp. C1TZA3 (1)
Gillisia hiemivivida (1)
Salvelinus sp. IW2-2015 (1)
Gelidibacter salicanalis (1)
Polaribacter sp. (1)
Gelidibacter gilvus (1)
Pseudoalteromonas sp. NJ289 (1)
Rhodococcus sp. NJ-530 (1)
Shewanella glacialimarina (1)
Phaeocystis antarctica (1)
Psychrobacter sp. ENNN9_III (1)
Aptenodytes forsteri (1)
Algoriphagus ratkowskyi (1)
Marinomonas arctica (1)
Psychromonas ingrahamii 37 (1)
Colwellia demingiae (1)
Chlamydomonas sp. ICE-L (1)
Polaribacter irgensii (1)

Repository

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Disease

Normal (5)
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Technology Type

Mass Spectrometry (40)
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Instrument Platform

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Publication Date

2010 (57)
2015 (52)
2013 (50)
2014 (48)
2011 (40)
2008 (40)
2012 (35)
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2016 (26)
2024 (14)
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2019 (9)
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2004 (8)
2020 (7)
2005 (7)
2018 (6)
2017 (6)
2006 (6)
2025 (6)

CHEBI ID

CHEBI:27470 (6)
CHEBI:16750 (6)
CHEBI:25017 (6)
CHEBI:28044 (6)
CHEBI:30753 (6)
CHEBI:16335 (6)
CHEBI:17596 (6)
CHEBI:16691 (5)
CHEBI:7916 (5)
CHEBI:27897 (5)
CHEBI:28865 (5)
CHEBI:84373 (4)
CHEBI:16765 (4)
CHEBI:16680 (4)
CHEBI:16709 (4)
CHEBI:16811 (4)
CHEBI:17533 (4)
CHEBI:15956 (4)
CHEBI:24898 (4)
CHEBI:28683 (4)
CHEBI:17015 (4)
CHEBI:30763 (4)
CHEBI:17509 (4)
CHEBI:16411 (4)
CHEBI:21615 (3)
CHEBI:17439 (3)
CHEBI:44111 (3)
CHEBI:18026 (3)
CHEBI:27744 (3)
CHEBI:15846 (3)

Metabolite Name

Folic acid (4)
Inosine (4)
Isoleucine (4)
Leucine (4)
Taurocholic acid (4)
Pantothenic acid (3)
N-acetyl muramic acid (3)
2,3-dihydroxypropane-1-sulfonate (3)
Xanthosine (3)
Tryptophan (3)
Kynurenine (3)
Guanosine (3)
4-hydroxybenzoic acid (3)
Dibutyl phthalate (DBP) (2)
Lyso-PC(16:0) (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
Tris(2-butoxyethyl) phosphate (2)
Tryptamine (2)
Syringic acid (2)
S-(5'-adenosyl)-L-homocysteine (2)
Riboflavin (2)
Nicotinamide adenine dinucleotide (2)
N-acetyl glutamic acid (2)
Inosine 5'-monophosphate (2)
Indole 3-acetic acid (2)
Glyphosate (2)
Desthiobiotin (2)
Biotin (2)
5-hydroxy-L-tryptophan (2)
4-aminobenzoic acid (2)

First Public Date

2026 (112)
2024 (65)
2025 (35)
2019 (35)
2022 (20)
2013 (20)
2018 (19)
2020 (16)
2021 (15)
2016 (14)
2017 (12)
2023 (11)
2014 (7)
2015 (5)

Study type

Transcription profiling by array (388)
RNA-seq of coding RNA (23)
Comparative genomic hybridization by array (4)
RNA-seq of coding RNA from single cells (4)
Unknown experiment type (3)
Other (3)
Animal - High-throughput sequencing (2)
Transcription profiling by tiling array (2)
ChIP-seq (2)
Cell line - Two-color microarray (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
Hi-C (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (149)
2024 (141)
2021 (141)
2023 (139)
2025 (132)
2019 (129)
2018 (129)
2020 (119)
2016 (106)
2015 (104)
2017 (99)
2014 (81)
2013 (78)
2010 (63)
2011 (56)
2012 (51)
2008 (46)
2009 (32)
2026 (24)
2007 (15)
2005 (9)
2004 (9)
2006 (8)
2003 (1)
2001 (1)

Lab affiliation

Institute for Microbiology, University of Greifswald, Felix-Hausdorff-Straße 8, 17489 Greifswald, Germany (3)
Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada (2)
Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (2)
Porto Conte Ricerche S.r.l. (2)
University of Washington, Department of Genome Sciences (2)
1 School of Pharmacy, University of Wisconsin-Madison, Madison, WI 53705, United States 2 Department of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, United States (1)
Analytical Chemistry Core Lab (ACL) – Proteomics Unit King Abdullah University of Science and Technology (KAUST) Thuwal, 23955-6900, Kingdom of Saudi Arabia (1)
Center for Neuroscience and Cell Biology of the University of Coimbra (1)
College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University (1)
College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, South Korea (1)
Department of Cardiology, Chengdu Third People’s Hospital/Affiliated Hospital of Southwest Jiaotong University, Chengdu, China. (1)
Department of Marine Biology, University of Haifa, Israel (1)
Food Safety Centre, Tasmanian Institute of Agriculture, University of Tasmania, Sandy Bay, Hobart, Tasmania, Australia (1)
Green Biotechnology, Institute of Plant Biology and Biotechnology (IBBP), University of Münster, Münster 48143, Germany (1)
Independent Research Association, Timisului 58, Bucharest, Romania. (1)
Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences (1)
Institute of Microbiology, Department of Microbial Proteomics, University of Greifswald, Germany (1)
Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China (1)
Institute of Parasitology Biology Center, Czech Academy of Sciences Branišovská 31 370 05 České Budějovice (1)
Institute of Plant Resources, Key Laboratory of Biotechnology and Bioresources Utilization, Ministry of Education, Dalian Nationalities University, Dalian 116600, China (1)
Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China (1)
Mass Spectrometry Centre, LAQV-REQUIMTE—Associated Laboratory for Green Chemistry of the Network of Chemistry and Technology, Department of Chemistry, University of Aveiro, 3810-193 Aveiro, Portugal (1)
National Institute of Standards and Technology, NIST - Charleston (1)
Nunn Lab, University of Washington, Department of Genome Sciences, Seattle, WA USA (1)
Nutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal (IATS-CSIC), 12595 Ribera de Cabanes, Castellón, Spain (1)
Professor. Lab head (1)
Proteomics mass spectrometry core facility, Central Science Laboratory, University of Tasmania, Australia (1)
Proteomics program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200 Copenhagen, Denmark (1)
Reader, School of Biological Science, University of Edinburgh (1)
University of Toronto (1)

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Composition and consumption of dissolved organic carbon in seawater under sea ice

Polar regions are an under-studied environment within the global ocean, with seawater found under sea ice particularly under-sampled. This project provides concentrations of select dissolved organic carbon compounds found in under-ice seawater sampled between March and May 2023. The dissolved org...

2026-07-02 | MTBLS12381 | MetaboLights

Sea-ice diatom compatible solute shifts

Not available

ORGANISM(S): Nitzschia lecointei

ST001393 | MetabolomicsWorkbench

RNA-seq transcriptome profiling of the psychrophilic diatom Fragilariopsis cylindrus under six treatments simulating conditions within sea ice

We performed RNA-sequencing experiments to examine gene expression in the genome of the cold-adapted (psychrophilic) marine diatom Fragilariopsis cylindrus to six different treatments simulating conditions found within sea ice. RNA-seq was performed on replicate samples for each experimental conditi...

ORGANISM(S): Fragilariopsis cylindrus

2018-01-18 | E-MTAB-5153 | biostudies-arrayexpress

sea ice

sea ice 16S rRNA

PRJEB7600 | ENA

Mosaicking Opportunistically Acquired Very High-Resolution Helicopter-Borne Images over Drifting Sea Ice Using COTS Sensors.

Not available

S-EPMC6427715 | biostudies-literature

Sea-ice algae

Sea-ice algae exposed to crude oil

PRJNA975194 | ENA

Sea ice 18S rRNA