Secretomes - OmicsDI

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Unknown (586)
Proteomics (330)
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Genomics (57)
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Organisms

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Organisms

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Emphysema (1)
Endometrial cancer (1)
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Esophagus adenocarcinoma (1)
Fatty liver disease (1)
Gastric adenocarcinoma (1)
Germ cell cancer (1)
Inflammation (1)
Melioidosis (1)
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Multiple sclerosis (1)
Myocardial ischemia (1)
Osteoarthritis (1)

Technology Type

Mass Spectrometry (208)
Shotgun proteomics (142)
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Gel-based experiment (7)
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Affinity purification coupled with mass spectrometry proteomics (2)
All-ion fragmentation (2)
DiaPASEF (2)
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RNA mass spectrometry (1)

Instrument Platform

Q Exactive (14)
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LTQ Orbitrap (5)
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MaXis (1)

Publication Date

2021 (49)
2024 (46)
2020 (46)
2025 (41)
2023 (33)
2022 (31)
2016 (31)
2018 (24)
2019 (22)
2026 (20)
2017 (15)
2015 (15)
2014 (12)
2013 (9)
2011 (4)
2010 (3)
2009 (3)
2012 (1)
2008 (1)

UNIPROT ID/AC

1433B_HUMAN (17)
1433E_HUMAN (17)
1433F_HUMAN (17)
1433G_HUMAN (17)
1433S_HUMAN (17)
1433T_HUMAN (17)
1433Z_HUMAN (17)
2A5A_HUMAN (17)
2A5D_HUMAN (17)
2A5E_HUMAN (17)
2A5G_HUMAN (17)
2AAA_HUMAN (17)
2ABA_HUMAN (17)
2ABD_HUMAN (17)
3BHS2_HUMAN (17)
3BP1_HUMAN (17)
3BP5L_HUMAN (17)
3HAO_HUMAN (17)
3HIDH_HUMAN (17)
3MG_HUMAN (17)
41_HUMAN (17)
4ET_HUMAN (17)
4F2_HUMAN (17)
5NT3A_HUMAN (17)
5NTC_HUMAN (17)
5NTD_HUMAN (17)
6PGD_HUMAN (17)
6PGL_HUMAN (17)
9606.ENSP00000228938 (17)
9606.ENSP00000233596 (17)

ENSEMBL ID

ENSG00000170477 (1)
ENSMUSG00000021039 (1)
ENSMUSG00000027651 (1)
ENSMUSG00000090272 (1)
ENSMUSG00000098557 (1)
ENSMUSP00000140201 (1)
ENSMUSP00000141097 (1)
ENSMUSP00000141542 (1)
ENSMUSP00000141637 (1)

CHEBI ID

CHEBI:16958 (3)
CHEBI:16235 (3)
CHEBI:68434 (2)
CHEBI:33508 (2)
CHEBI:16450 (2)
CHEBI:17822 (2)
CHEBI:26271 (2)
CHEBI:25094 (2)
CHEBI:18237 (2)
CHEBI:30865 (2)
CHEBI:16040 (2)
CHEBI:22660 (2)
CHEBI:22653 (2)
CHEBI:27570 (2)
CHEBI:18186 (2)
CHEBI:26986 (2)
CHEBI:16811 (2)
CHEBI:17234 (2)
CHEBI:28300 (2)
CHEBI:18257 (2)
CHEBI:17533 (2)
CHEBI:16708 (2)
CHEBI:16742 (2)
CHEBI:17562 (2)
CHEBI:16750 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:72665 (2)
CHEBI:19138 (2)
CHEBI:60943 (2)

Metabolite Name

AMP (2)
12-HETE (2)
5-HETE (2)
Guanine (2)
Sulindac sulfone (1)
Sulindac sulfide (1)
Sulindac (1)
Olmesartan (1)
Imipramine (1)
Dexlansoprazole (1)
LXA4 (1)
15-deoxy-12-14-PGD2 (1)
12-HETrE (1)
15-deoxy-12-14-PGJ2 (1)
9-10-DiHOME (1)
12-13-DiHOME (1)
Catechol glucuronide (1)
Acetyl-L-carnitine (2.0) (1)
N-Ac-Muramate (1)
N-Ac-Glucosamine-6P (1)
N-Ac-Glucosamine (1)
OphthalmicAcid (1)
Butyryl-L-carnitine (4.0) (1)
Hexanoyl-L-carnitine (6.0) (1)
S-Adenosyl-Homocysteine (1)
S-Adenosyl-Methionine (1)
UDP-N-Ac-Glucosamine (1)
Myristoyl-L-carnitine (14.0) (1)
AcetylCoA (1)
Palmitoyl-L-carnitine (16.0) (1)

First Public Date

2024 (8)
2014 (6)
2026 (5)
2025 (5)
2016 (5)
2021 (4)
2023 (3)
2020 (3)
2019 (3)
2015 (3)
2018 (2)
2022 (1)
2013 (1)

Classification

fungi (2)
bacteria (1)

Modification

4x(15)N labeled L-arginine (2)
57.021464 (2)
Not available (2)
15.994915 (1)
4x(2)H labeled dimethylated L-lysine (1)
4x(2)H labeled dimethylated residue (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (27)
RNA-seq of coding RNA (14)
ChIP-seq (2)
Animal - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Comparative genomic hybridization by array (1)
CUT&RUN (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2021 (74)
2022 (67)
2025 (66)
2023 (58)
2020 (50)
2019 (44)
2024 (43)
2015 (43)
2018 (36)
2014 (30)
2017 (27)
2016 (25)
2013 (16)
2011 (13)
2010 (12)
2012 (10)
2009 (6)
2026 (6)
2008 (5)
2007 (1)
2006 (1)
2005 (1)
2004 (1)

Lab affiliation

University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (6)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (4)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands (4)
Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece (3)
Center for Neuroscience and Cell Biology – University of Coimbra (2)
Centre for Functional Ecology, University of Coimbra (2)
Institute for Clinical Biochemistry and Pathobiochemistry, German Diabetes Center (DDZ), Leibniz Center for Diabetes Research at Heinrich-Heine-University Düsseldorf, Auf´m Hennekamp 65, 40225 Düsseldorf, Germany (2)
Laboratory of Enzymology and Molecular Biology (LEBIMO), Institute of Biology, University of Campinas (UNICAMP) (2)
School of Life Sciences, Swiss Federal Institute of Technology in Lausanne (EPFL) (2)
Tilden-Weger-Bieler Professor of Medicine Chief of Preventive Medicine & Nutrition Columbia University (2)
UNC Chapel Hill (2)
University of Bergen (2)
University of York (2)
1. Département de Biologie, Université Laval, Québec, QC, Canada 2. Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, QC, Canada (1)
1Research Unit Protein Science and Metabolomics and Proteomics Core, Helmholtz Zentrum München, German Research Center for Environmental Health, D-85764 Neuherberg, Germany (1)
Amgen Inc. (1)
Assistant Professor of Medicine (Hematology) Senior Fellow, Duke Aging Center Duke Molecular Physiology Institute Duke University School of Medicine (1)
Assistant Professor of Pathology Stanford ChEM-H Institute Scholar Stanford University (1)
Australian Institute of Tropical Health and Medicine, James Cook University, Cairns, Australia (1)
BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit, College of Pharmacy and Research Institute of Pharmaceutical Sciences, Kyungpook National University (1)
BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit, College of Pharmacy and Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea (1)
Bavarian Center for Biomolecular Mass Spectrometry at Klinikum rechts der Isar Technical University of Munich (1)
Bavarian Center for Biomolecular Mass Spectrometry at Klinikum rechts der Isar, Technical University of Munich, 81675 Munich, Germany (1)
Bavarian Center for Biomolecular Mass Spectrometry, Technical University of Munich, Freising, Germany (1)
Biomedical Research in Melanoma-Animal Models and Cancer Laboratory- Vall d´Hebron Research Institute VHIR-Vall d’Hebron Hospital Barcelona-UAB 08035, Spain. (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, University of Utrecht, Padualaan 8, Utrecht 3584 CH, The Netherlands (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, the Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, the Netherlands. (1)
Biosciences Institute, Newcastle University, Newcastle upon Tyne, United Kingdom (1)
Biotech Research & Innovation Centre, University of Copenhagen, Denmark (1)
Biotech Research and Innovation Centre (BRIC) University of Copenhagen Ole Maaløes Vej 5 2200 Copenhagen N Denmark (1)

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An Atlas of Ferroptosis-induced Secretomes promotes Macrophage priming

Cells undergoing regulated necrosis systemically communicate with the immune system via release of protein and non-protein secretomes. Ferroptosis is a recently described iron-dependent type of regulated necrosis driven by massive lipid peroxidation. While membrane rupture occurs during ferroptosis,...

2025-03-04 | MTBLS9798 | MetaboLights

Effect of therapy-induced secretomes on the transcriptome of ovarian cancer cells

PRJNA1010741 | ENA

Activity-based protein profiling of xylan-degrading glycoside hydrolases in Aspergillus secretomes

Plant polysaccharides represent a virtually unlimited feedstock for the generation of biofuels and other commodities. However, the extraordinary recalcitrance of plant polysaccharides towards breakdown necessitates a continued search for enzymes that degrade these materials efficiently under defined...

ORGANISM(S): Aspergillus Niger (ncbitaxon:5061)

2019-04-24 | MSV000083714 | MassIVE

Effect of therapy-induced secretomes on the transcriptome of ovarian cancer cells

Exogenous signals from drug-stressed cancer cells promote acquisition of a more aggressive phenotype of neighboring tumor cells. Recently, we examined how cancer cell secretome changes in response to chemotherapy. We showed that tumor therapy-induced secretomes significantly increased resistance of ...

ORGANISM(S): Homo sapiens

2024-04-24 | GSE241910 | GEO

RNA-seq of mesenchymal stromal cells cultured in the presence of breast cancer cell secretomes

Mesenchymal stromal cells were cultured in 3D PEG hydrogels for 7 days in the presence of serum-free media or conditioned media from a panel of breast cancer cells (MCF-7, MDA-MB-231, MDA-MB-231 lung-tropic, MDA-MB-231 brain-tropic, MDA-MB-231 bone-tropic). In all cases, the secretomes were collecte...

ORGANISM(S): Homo sapiens

2019-05-28 | E-MTAB-6998 | biostudies-arrayexpress

An atlas of ferroptosis-induced secretomes.

Not available

S-EPMC12572367 | biostudies-literature

RNA-seq of mesenchymal stromal cells cultured in the presence of breast cancer cell secretomes

PRJEB27694 | ENA

Bioinformatic comparison of bacterial secretomes.

Not available

S-EPMC5054224 | biostudies-literature

Intrapericardial administration of secretomes from endometrial-derived mesenchymal stromal cells: effects on immune-related genes in a porcine model of myocardial infarction

PRJNA720692 | ENA