Sort   by:  
 Page size 
TranscriptomicsExpression data for drought-, cold, high-salinity and ABA treatment in Arabidopsis plants
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome under drought, cold, high-salinity and ABA treatment conditions and idenfied many stress- or ABA- responsive putative functional RNAs and fully-overlapping sense-antisense transcripts in Arabidopsis genome. Keywords: st...
ORGANISM(S): Arabidopsis thaliana 
2008-11-19 | E-GEOD-9646 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis len3 mutants
Arabidopsis lesion initiation 3 mutant
ORGANISM(S): Arabidopsis thaliana 
2008-04-17 | E-MEXP-1084 | biostudies-arrayexpress
ProteomicsAnalysis of differential expression patterns of mRNA and protein during cold- and de-acclimation in Arabidopsis
Overwintering plants are capable of exhibiting high levels of cold tolerance, which is acquired through the process of cold acclimation (CA). In contrast to CA, the acquired freezing tolerance is rapidly reduced during cold de-acclimation (DA) and plants resume growth after sensing warm temperatures...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2014-10-02 | PXD001216 | Pride
Nano-lc-ms/ms Arabidopsis Cold deacclimation Cold acclimation 
TranscriptomicsDevelopment of a high-density oligo microarray of cassava, an important tropical crop
We developed a 60-mer oligonucleotide Agilent microarray representing about 20,000 cassava genes and applied it to expression profiling under drought stress. We demonstrated that our microarray is an useful tool for analyzing the cassava transcriptome and that it can be applied to various cassava sp...
ORGANISM(S): Manihot esculenta subsp. peruviana 
2012-06-14 | E-GEOD-31749 | biostudies-arrayexpress
TranscriptomicsExpression data in Arabidopsis fry1-6, xrn2-4, xrn3-3 and xrn4-6 mutants.
We applied the tiling arrays to study the Arabidopsis whole-genome transcriptome in Arabidopsis fry1-6, xrn2-4, xrn3-3 and xrn4-6 mutants. The total RNA was prepared from 15-day-old Arabidopsis plants grown on the agar plates and used for the microarray hybridization. Three replicative hybridizati...
ORGANISM(S): Arabidopsis thaliana 
2012-05-02 | E-GEOD-32977 | biostudies-arrayexpress
TranscriptomicsDifference in gene expression between WT (Col-0) and atxrn4-3 mutant under non-stress and heat stress condition
Arabidopsis 5’-3’ exoribonuclease, AtXRN4, a homolog of yeast Xrn1p, functions in degradation of uncapped RNAs after de-capping step. While Xrn1p-dependent on plant XRN4’s targets for degradation is still limited. For understanding biological function of AtXRN4, we tested survivability of atxrn4 mut...
ORGANISM(S): Arabidopsis thaliana 
2015-07-14 | E-GEOD-66369 | biostudies-arrayexpress
TranscriptomicsExpression data in an Arabidopsis cytokinin (CK)-signaling mutant, ahp2,3,5 and its wild type plant (Col-0) under drought and well-water (control) conditions.
To understand the role of CK-signaling components, AHPs (His-containing phosphotransfer proteins) in drought stress response, we have employed transcriptional profiling of ahp2,3,5 and it's wild type plant, Col-0 under drought and well-water (control) conditions. AligentM-bM-^@M-^Ys Whole Arabidopsi...
ORGANISM(S): Arabidopsis thaliana 
2013-02-15 | E-GEOD-42290 | biostudies-arrayexpress
TranscriptomicsOligouridylate binding protein 1b functions in plant heat stress tolerance
To understand affected genes by overexpression of origouridylate binding protein 1b (UBP1b) under heat stress conditions, transcriptional profiling of UBP1box and control plants were analyzed under normal and heat stress (40°C) conditions using Arabidopsis custom microarrays. Microarray analysis wa...
ORGANISM(S): Arabidopsis thaliana 
2016-08-21 | E-GEOD-78713 | biostudies-arrayexpress
TranscriptomicsComparative expression analysis of the Arabidopsis strigolactone (SL)-response mutant, max2-3, and wild type (WT) plants (Col-0) under dehydration conditions.
To understand the role of SL-signaling components in water stress response, we have carried out comparative expression analysis of the SL-response max2-3 mutant and WT plants under dehydration and well-watered (control) conditions. AligentM-bM-^@M-^Ys whole Arabidopsis Gene Expression Microarray (G2...
ORGANISM(S): Arabidopsis thaliana 
2013-11-26 | E-GEOD-48949 | biostudies-arrayexpress
TranscriptomicsGenome-wide expression profiling of PpABI1 disruptants
To investigate the disruption effect of Group A PP2C on global gene expression in Physcomitrella patens, we performed microarray analysis of wildtype plant and PpABI1 disruptants using a custom Physcomitrella oligonucleotide microarray, which carries probes for 33,942 gene models of Physcomitrella g...
ORGANISM(S): Physcomitrella patens 
2013-07-31 | E-GEOD-37694 | biostudies-arrayexpress
Sort   by:  
 Page size