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UnknownEvidence for sequenced molecular evolution of IDH1 mutant glioblastoma from a distinct cell of origin.
Not available
S-EPMC3236649 | biostudies-literature
TranscriptomicsDeep transcriptional sequencing analysis of human prostate adenocarcinoma and reference samples
Prostate adenocarcinoma and matched adjacent normal samples were profiled by deep transcriptional sequencing to analyze transcription-induced chimeras and gene fusions. Reference samples from the MAQC and brain and universal reference libraries were also sequenced. Two-condition experiment plus ref...
ORGANISM(S): Homo sapiens 
2010-09-23 | E-GEOD-24283 | biostudies-arrayexpress
TranscriptomicsAgilent 244A aCGH array for breast, lung, melanoma, ovary, and prostate
373 tumors were profiled for copy-number alterations with the high-resolution Agilent 244A aCGH Array. Tumor samples were assayed on Agilent Human Genome CGH 244A Microarrays with the intent of surveying the landscape of genomic alterations in 5 tumor types. Human male genomic DNA (Promega P/N G1471...
ORGANISM(S): Homo sapiens 
2010-07-29 | E-GEOD-20393 | biostudies-arrayexpress
UnknownHuman ACE2 receptor polymorphisms and altered susceptibility to SARS-CoV-2.
Not available
S-EPMC8041869 | biostudies-literature
GenomicsPrediction and quantification of splice events from RNA-seq data
Analysis of splice variants from short read RNA-seq data remains a challenging problem. Here we present a novel method for the genome-guided prediction and quantification of splice events from RNA-seq data, which enables the analysis of unannotated and complex splice events. Splice junctions and exo...
EGAS00001001026 | EGA
TranscriptomicsAgilent 244A aCGH array for comparison of lung tumor CNA to high-throughput sequencing data
1 lung tumor was profiled for copy-number alterations with the high-resolution Agilent 244A aCGH Array. One lung tumor sample were assayed on the Agilent Human Genome CGH 244A Microarrays with the intent of comparing the genomic alterations reported by the array platform with those reported by high-...
ORGANISM(S): Homo sapiens 
2010-05-27 | E-GEOD-20574 | biostudies-arrayexpress
TranscriptomicsAssessment of mutation on expression levels
One lung tumor and its adjacent normal were profiled for expression levels with the Affymetrix HGU133 plus 2.0 array. One lung tumor sample and its adjacent normal were assayed on the Affymetrix HG-U133 plus 2.0 array to assess the effects of mutation on expression.
ORGANISM(S): Homo sapiens 
2011-02-21 | E-GEOD-20578 | biostudies-arrayexpress
Genomicsena-DATASET-Genentech-18-02-2016-19:31:54:532-12 - samples
RNA-seq from normal human tissues (2 x 250 bp)
EGAD00001001922 | EGA
Genomicsena-DATASET-Genentech-07-11-2014-17:09:43:626-885 - samples
RNA-seq from normal human tissues (2 x 75 bp)
EGAD00001001057 | EGA
Genomicsena-DATASET-SGL-15-10-2012-16:36:28:919-5 - samples
This dataset contain the raw files generated for SAIF genome project
EGAD00001000254 | EGA
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