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TranscriptomicsGcrA depletion study (Caulobacter vibrioides)
Supporting data for: Holtzendorff et. al., "Oscillating global regulators." Keywords = gcrA Keywords = global regulator
ORGANISM(S): Caulobacter vibrioides 
2004-03-22 | E-GEOD-1135 | biostudies-arrayexpress
TranscriptomicsThe Global Landscape of Transcription Initiation During the Caulobacter Cell Cycle [timecourse]
The Caulobacter cell cycle includes in an asymmetric cell division that is driven by a core regulatory circuit comprised of 4 transcription factors (DnaA, GcrA, CtrA, and SciP) and a DNA methyltransferase (CcrM). Using a modified global 5M-bM-^@M-^Y RACE protocol we mapped 2,726 transcriptional sta...
ORGANISM(S): Caulobacter crescentus NA1000 
2014-10-16 | E-GEOD-57364 | biostudies-arrayexpress
TranscriptomicsThe Global Landscape of Transcription Initiation During the Caulobacter Cell Cycle [mapping]
The Caulobacter cell cycle includes in an asymmetric cell division that is driven by a core regulatory circuit comprised of 4 transcription factors (DnaA, GcrA, CtrA, and SciP) and a DNA methyltransferase (CcrM). Using a modified global 5M-bM-^@M-^Y RACE protocol we mapped 2,726 transcriptional sta...
ORGANISM(S): Caulobacter crescentus NA1000 
2014-10-16 | E-GEOD-57365 | biostudies-arrayexpress
TranscriptomicsThe coding and noncoding architecture of the Caulobacter crescentus genome
Caulobacter crescentus undergoes an asymmetric cell division controlled by a genetic circuit that cycles in space and time. We provide a universal strategy for defining the coding potential of bacterial genomes by applying ribosome profiling, RNA-seq, global 5’-RACE, and liquid chromatography coupl...
ORGANISM(S): Caulobacter crescentus NA1000 
2014-05-29 | E-GEOD-54883 | biostudies-arrayexpress
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