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TranscriptomicsGenetic Determinants for Susceptibility to Staphylococcus aureus Infection in A/J and C57BL/6J
Although it has recently been shown that A/J mice are highly susceptible to Staphylococcus aureus sepsis as compared to C57BL/6J, the specific genes responsible for this differential phenotype are unknown. Using chromosome substitution strains (CSS), we found that factors on chromosomes (chr) 8, 11,...
ORGANISM(S): Mus musculus 
2010-08-01 | E-GEOD-19668 | biostudies-arrayexpress
UnknownFraction of gestational diabetes mellitus attributable to overweight and obesity by race/ethnicity, California, 2007-2009.
Not available
S-EPMC3780749 | biostudies-literature
ProteomicsMonitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication, Batch 1
Base lesions in DNA can stall the replication machinery or induce mutations if bypassed. Consequently, lesions must be repaired before replication or in a post-replicative process to maintain genomic stability. Base excision repair (BER) is the main pathway for repair of base lesions, but how BER is...
ORGANISM(S): Homo sapiens (Human) 
2017-11-23 | PXD004288 | Pride
Ber Ipond Batch 1 Orbitrap Ssbr Replication Quantification Replisome Label free 
ProteomicsMonitoring of the spatial and temporal dynamics of BER/SSBR pathway proteins, including MYH, UNG2, MPG, NTH1 and NEIL1-3, during DNA replication, Batch 2
Base lesions in DNA can stall the replication machinery or induce mutations if bypassed. Consequently, lesions must be repaired before replication or in a post-replicative process to maintain genomic stability. Base excision repair (BER) is the main pathway for repair of base lesions, but how BER is...
ORGANISM(S): Homo sapiens (Human) 
2017-11-23 | PXD004494 | Pride
Ber Ipond Batch 2 Orbitrap Ssbr Replication Quantification Replisome Label free 
ProteomicsIdentification of BER/SSBR proteins and the DNA glycosylases MPG, UNG2, MYH, NTH1, NEIL1 and NEIL3 in replisomes Batch 3
Base lesions in DNA can stall the replication machinery or induce mutations if bypassed. Consequently, lesions must be repaired before replication or in a post-replicative process to maintain genomic stability. Base excision repair (BER) is the main pathway for repair of base lesions, but how BER is...
ORGANISM(S): Homo sapiens (Human) 
2024-06-07 | PXD004324 | Pride
Ber Batch 3 Ipond Orbitrap Ssbr Replication Quantification Replisome Label free 
TranscriptomicsExpression data in Staphylococcus aureus-infected mice with linezolid and vancomycin treatment
The precise mechanism and effects of antibiotics in host gene expression and immunomodulation in MRSA infection is unknown. Using a well characterized Methicillin Resistant Staphylococcus aureus (MRSA) isolate USA300 in a murine model of infection, we determined that linezolid and vancomycin induced...
ORGANISM(S): Mus musculus 
2014-06-05 | E-GEOD-38531 | biostudies-arrayexpress
UnknownThe Relationship of Pork Meat Consumption with Nutrient Intakes, Diet Quality, and Biomarkers of Health Status in Korean Older Adults.
Not available
S-EPMC11644605 | biostudies-literature
UnknownPerfusability and immunogenicity of implantable pre-vascularized tissues recapitulating features of native capillary network.
Not available
S-EPMC10425689 | biostudies-literature
ProteomicsA global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence
Small proteins are an emerging class of gene products with diverse roles in bacterial physiology. However, a full understanding of their importance has been hampered by insufficient genome annotations and a lack of characterization in microbes other than Escherichia coli. Here, we have taken an inte...
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium 
2020-12-07 | PXD018754 | Pride
Salmonella typhimurium Virulence Dual rna-seq Grad-seq Tradis Host-pathogen interaction Infection Mgrb Spepfinder Small proteins Ribo-seq 
TranscriptomicsTranscriptional analysis of phloem-associated cells of potato
To better understand the function of the phloem in plants, we have combined laser capture microdissection (LCM) and RNA-seq for an in-depth transcriptional profile of phloem-associated cells of both petioles and stems of potato. Out of the 27k transcripts assembled that we identified, approximately ...
ORGANISM(S): Solanum tuberosum 
2015-08-02 | E-MTAB-4251 | biostudies-arrayexpress
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