Sharp D D - OmicsDI

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Unknown (3160)
Transcriptomics (214)
Genomics (59)
Proteomics (34)
Metabolomics (7)
Models (3)

Organisms

Homo sapiens (86)
Mus musculus (79)
Rattus norvegicus (11)
Arabidopsis thaliana (10)
Salmo salar (5)
Triticum aestivum (5)
Drosophila melanogaster (5)
Penicillium chrysogenum (4)
Saccharomyces cerevisiae (4)
Sus scrofa (4)
Danio rerio (4)
Bacillus subtilis subsp. subtilis str. 168 (3)
Coturnix japonica (3)
Hordeum vulgare (3)
Bifidobacterium bifidum (2)
Micropterus salmoides (2)
Pachycara brachycephalum (2)
Zea mays (2)
Vertebrata (1)
Bifidobacterium animalis subsp. lactis BB-12 (1)
Picea sitchensis (1)
Oncorhynchus nerka (1)
Boreogadus saida (1)
Trichoderma reesei QM6a (1)
Geospiza magnirostris (1)
Aspergillus niger (1)
Synechocystis sp. PCC 6803 (1)
Seminavis robusta (1)
Leishmania major (1)
Streptococcus thermophilus (1)

Organisms

Gavialis gangeticus (3)
Platysternon megacephalum (3)
Orycteropus afer (3)
Drosophila melanogaster (2)
Escherichia coli str. K-12 substr. MG1655 (1)
Sus scrofa (1)
Rattus norvegicus (1)
Homo sapiens (1)
Mus musculus (1)
Bacillus subtilis (1)

Repository

biostudies-arrayexpress (229)
pride (29)
ENA (29)
EGA (11)
MetaboLights (7)
geo (5)
MassIVE (4)
BioModels (2)
Cell Collective (1)
PanoramaPublic (1)

Tissue

Fibroblast (4)
Skin (4)
Heart (2)
Blood serum (1)
Brain (1)
Colon (1)
Colonic mucosa (1)
Dendritic cell (1)
Early embryonic cell (1)
Embryo (1)
Epithelial cell (1)
Extracellular matrix constituent secretion (1)
Kidney (1)
Lymph node (1)
Permanent cell line cell (1)
Saliva (1)
Seed (1)
Submandibular gland (1)
Sweat gland (1)
T cell (1)

Disease

Normal (1)
Colon cancer (1)
Irritable bowel syndrome (1)
Toxoplasmosis (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (29)
Shotgun proteomics (20)
Mass spectrometry (6)
Gel-based experiment (3)
Illumina HiSeq 2000 (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Bottom-up proteomics (2)
Data-dependent acquisition (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2500, ILLUMINA (1)
NMR spectroscopy (1)
Mass spectrometry imaging (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (8)
Illumina HiSeq 4000 (5)
Liquid Chromatography MS - positive - reverse phase (4)
NextSeq 550 (3)
Illumina HiSeq 2500 (3)
Axon- GenePix4000B (2)
NextSeq 500 (2)
Direct infusion MS - positive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Scanning hardware (1)
NextSeq 1000 (1)
- (1)
Illumina HiSeq 3000 (1)
Exactive Plus (1)
LTQ Orbitrap (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
Bruker (1)
Direct infusion MS - alternating (1)
Direct infusion MS - negative (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2015 (36)
2014 (32)
2010 (27)
2013 (25)
2012 (22)
2011 (19)
2008 (17)
2023 (13)
2024 (11)
2016 (11)
2022 (10)
2019 (8)
2025 (7)
2017 (7)
2021 (6)
2007 (6)
2009 (5)
2020 (4)
2018 (4)
2004 (3)
2026 (2)
2006 (1)

UNIPROT ID/AC

O43174 (1)
P55075 (1)
Q6V0L0 (1)
Q9NR63 (1)

CHEBI ID

CHEBI:134270 (2)
CHEBI:16113 (2)
CHEBI:16196 (2)
CHEBI:18211 (2)
CHEBI:30769 (2)
CHEBI:32816 (2)
CHEBI:37024 (2)
CHEBI:64424 (2)
CHEBI:64517 (2)
CHEBI:66849 (2)
CHEBI:66850 (2)
CHEBI:71731 (2)
CHEBI:71736 (2)
CHEBI:7916 (2)
CHEBI:26536 (1)
CHEBI:33699 (1)
CHEBI:113542 (1)
CHEBI:1148 (1)
CHEBI:132004 (1)
CHEBI:132007 (1)
CHEBI:134239 (1)
CHEBI:134241 (1)
CHEBI:134243 (1)
CHEBI:134271 (1)
CHEBI:134428 (1)
CHEBI:134435 (1)
CHEBI:134451 (1)
CHEBI:134561 (1)
CHEBI:134648 (1)
CHEBI:136196 (1)

Metabolite Name

Aminoadipic acid (2)
Oleic acid (2)
PI(40:7) (2)
Pantothenic acid (2)
(S)-2,3,4,5-tetrahydropyridine-2-carboxylate (1)
(S)-5-Amino-3-oxohexanoate (1)
1-Aminocyclopropanecarboxylic acid (1)
1-Methylnicotinamide (1)
2-Hydroxy-2-ethylsuccinic acid (1)
2-Hydroxybutyric acid (1)
2-methoxy-3-(1-methylpropyl) pyrazine (1)
25-Hydroxycholesterol (1)
3-(2-Hydroxyphenyl)propanoic acid (1)
4-Hydroxyphenylacetaldehyde (1)
4-Pyridoxic acid (1)
4-methylheptadecane (1)
5-Hydroxylysine (1)
5-Methylthioadenosine (1)
5-S-Methyl-5-thioinosine (1)
AMP (1)
Adenine (1)
Adenosine (1)
Alpha hydroxylauric acid (1)
Argininosuccinic acid (1)
Ascorbic acid (1)
Benzoate (1)
CAEP(32:1) (1)
CAEP(33:1) (1)
CAEP(33:2) (1)
CAEP(34:1) (1)

First Public Date

2026 (7)
2023 (6)
2014 (5)
2025 (2)
2024 (2)
2021 (2)
2018 (2)
2017 (2)
2022 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Department of Geoscience, University of Calgary (2)
German Cancer Research Center Heidelberg University Clinic Heidelberg (2)
ICM, Molecular Evolution, Uppsala University (2)
Acupuncture-moxibustion and Orthopedic College, Hubei University of Chinese Medicine, Wuhan, China (1)
Advanced Technology Walter & ELiza Hall Institute (1)
Center for Proteomics & Artificial Intelligence Center for Clinical Mass Spectrometry Allegheny Health Network Cancer Institute 100 S Jackson Ave., Pittsburgh, PA 15202 (1)
Center of Regenerative Medicine in Barcelona (CMRB) (1)
Central Diagnostic Laboratory Maastricht University Medical Centre Maastricht, the Netherlands (1)
Department of Archaeology, Max Planck Institute for the Science of Human History. (1)
Department of BioMOlecular Sciences University of Mississippi (1)
Department of Biological Chemistry, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA (1)
Department of Biological Sciences, Seoul National University, Seoul 08826, Republic of Korea (1)
Department of Chemical Engineering, Indian Institute of Technology, Delhi (1)
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 171 77 Stockholm, Sweden (1)
Director Glycoscience Center of Research Excellence (GlyCORE) Associate Professor of Pharmacology Associate Professor of Chemistry and Biochemistry The University of Mississippi School of Pharmacy Department of BioMolecular Sciences P.O. Box 1848 445 Faser Hall University, MS 38677-1848 (1)
Division head B230 Proteomics of Stem Cells and Cancer (1)
Division of Proteomics of Stem Cells and Cancer, German Cancer Research Center, Heidelberg, Germany (1)
Evolutionary and translational venomics Lab, Instituto de Biomedicina de Valencia, CSIC (1)
Experimental Systems Immunology Laboratory, Max-Planck Institute of Biochemistry, Martinsried, Germany. (1)
Head of the Curie Institute Mass Spectrometry Platform (1)
INRA - Centre Val de Loire (1)
Laboratory Head and Chemical Biology Division Head, WEHI, Australia (1)
Ludwig Boltzmann Institute for Traumatology, The Research Center in Cooperation with AUVA, Austrian Cluster for Tissue Regeneration, The laboratory for Tissue Damage Responses in Regeneration and Aging,Donaueschingenstrasse 13, A-1200 Vienna, Austria, (1)
North Carolina State University, NC, USA (1)
School of Infection and Immunity ,MVLS, University of Glasgow (1)
University of Health Sciences Turkey (1)