Shen Q Q - OmicsDI

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Unknown (11010)
Proteomics (318)
Transcriptomics (124)
Metabolomics (81)
Genomics (27)
Multiomics (3)

Organisms

Homo sapiens (215)
Mus musculus (116)
Rattus norvegicus (11)
Oryza sativa (10)
Arabidopsis thaliana (8)
Sus scrofa (4)
Zea mays (4)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (2)
Camponotus floridanus (2)
Campylobacter jejuni (2)
Oryza sativa Japonica Group (2)
Drosophila melanogaster (2)
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Nicotiana tabacum (1)
Glycine max (1)
Caenorhabditis elegans (1)
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Angelica dahurica var. formosana (1)
Astragalus mongholicus var. dahuricus (1)
Bos taurus (1)
Cuscuta chinensis var. chinensis (1)
Glycyrrhiza uralensis (1)
Gynochthodes officinalis (1)
Ligusticum chuanxiong (1)

Repository

pride (219)
biostudies-arrayexpress (146)
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iProX (77)
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EGA (5)
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PAXDB (1)

Tissue

Cell culture (42)
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Disease

Breast cancer (5)
Acute leukemia (3)
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Malaria (2)
Malignant neoplasm of ovary (2)
Non-alcoholic steatohepatitis (2)
Acute promyelocytic leukemia (1)
Colorectal adenocarcinoma (1)
Antenatal onset (1)
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Cholangiocarcinoma (1)
Chronic myeloid leukemia (1)
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Disease free (1)
Echinococcosis (1)
Human immunodeficiency virus infectious disease (1)
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Melanoma (1)
Nephrotic syndrome (1)
Neuropathic pain (1)
Obesity (1)
Osteosarcoma (1)
Pancreatic cancer (1)
Parkinson's disease (1)
Polycystic ovary syndrome (1)

Technology Type

Mass Spectrometry (219)
Shotgun proteomics (126)
Mass spectrometry (60)
Bottom-up proteomics (28)
Affinity purification coupled with mass spectrometry proteomics (21)
Data-dependent acquisition (19)
Mass spectrometry assay (18)
Gel-based experiment (17)
Top-down proteomics (12)
Data-independent acquisition (8)
SWATH MS (6)
SRM/MRM (5)
All-ion fragmentation (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Immunopeptidomics (2)
Proteogenomics (2)
NMR spectroscopy (1)
Affinity proteomics (1)
DiaPASEF (1)
Glycoproteomics (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (41)
Liquid Chromatography MS - negative - reverse phase (28)
Liquid Chromatography MS - positive - hilic (11)
Liquid Chromatography MS - negative - hilic (10)
Q Exactive (8)
Liquid Chromatography MS - negative - reverse-phase (7)
Liquid Chromatography MS - positive - reverse-phase (7)
Illumina HiSeq 4000 (4)
Liquid Chromatography MS - positive (4)
Illumina NovaSeq 6000 (3)
Q Exactive HF (3)
Liquid Chromatography MS - negative (3)
HiSeq X Ten (2)
NextSeq 500 (2)
TripleTOF 6600 (2)
LTQ Orbitrap Velos (2)
Orbitrap Fusion Lumos (2)
6540 Q-TOF LC/MS (Agilent) (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - (2)
Affymetrix GeneChip Scanner 3000 7G (1)
Illumina Genome Analyzer (1)
Illumina Genome Analyzer II (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Exactive Plus (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Fusion (1)
Q Exactive Plus (1)
TSQ Quantiva (1)

Publication Date

2022 (68)
2025 (50)
2023 (48)
2026 (45)
2024 (44)
2021 (40)
2020 (34)
2019 (29)
2015 (27)
2012 (24)
2016 (22)
2014 (22)
2013 (21)
2018 (20)
2017 (16)
2010 (11)
2011 (9)
2009 (3)
2008 (3)
2007 (2)
2005 (2)
2027 (2)

UNIPROT ID/AC

14331_SOLTU (1)
14332_SOLTU (1)
14335_SOLTU (1)
4113.PGSC0003DMT400001418 (1)
4113.PGSC0003DMT400002078 (1)
4113.PGSC0003DMT400003947 (1)
4113.PGSC0003DMT400005135 (1)
4113.PGSC0003DMT400005136 (1)
4113.PGSC0003DMT400005427 (1)
4113.PGSC0003DMT400009647 (1)
4113.PGSC0003DMT400009751 (1)
4113.PGSC0003DMT400013958 (1)
4113.PGSC0003DMT400015957 (1)
4113.PGSC0003DMT400016201 (1)
4113.PGSC0003DMT400022438 (1)
4113.PGSC0003DMT400027147 (1)
4113.PGSC0003DMT400027379 (1)
4113.PGSC0003DMT400029003 (1)
4113.PGSC0003DMT400031900 (1)
4113.PGSC0003DMT400034164 (1)
4113.PGSC0003DMT400034190 (1)
4113.PGSC0003DMT400035006 (1)
4113.PGSC0003DMT400035007 (1)
4113.PGSC0003DMT400038109 (1)
4113.PGSC0003DMT400040121 (1)
4113.PGSC0003DMT400040171 (1)
4113.PGSC0003DMT400040182 (1)
4113.PGSC0003DMT400041662 (1)
4113.PGSC0003DMT400043254 (1)
4113.PGSC0003DMT400045338 (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16704 (23)
CHEBI:17015 (22)
CHEBI:16708 (21)
CHEBI:17154 (21)
CHEBI:17295 (21)
CHEBI:16335 (20)
CHEBI:17368 (20)
CHEBI:17568 (20)
CHEBI:17895 (20)
CHEBI:18344 (20)
CHEBI:30769 (20)
CHEBI:15756 (19)
CHEBI:17203 (19)
CHEBI:55328 (19)
CHEBI:16359 (18)
CHEBI:16467 (18)
CHEBI:16750 (18)
CHEBI:17351 (18)
CHEBI:17405 (18)
CHEBI:17750 (18)
CHEBI:116314 (17)
CHEBI:15354 (17)
CHEBI:16040 (17)
CHEBI:16566 (17)
CHEBI:17596 (17)
CHEBI:28865 (17)
CHEBI:48131 (17)
CHEBI:7916 (17)
CHEBI:15676 (16)
CHEBI:15741 (16)

Metabolite Name

Adenine (19)
Uridine (19)
Hypoxanthine (17)
Guanosine (16)
Cholic acid (15)
Uracil (15)
Adenosine (14)
Creatinine (14)
L-Arginine (14)
L-Phenylalanine (14)
Inosine (13)
L-Tyrosine (13)
Riboflavin (13)
4-Pyridoxic acid (12)
Citric acid (12)
Creatine (12)
Cytidine (12)
Dodecanedioic acid (12)
Nicotinamide (12)
Oleamide (12)
Taurine (12)
Betaine (11)
Choline (11)
Kynurenic acid (11)
Linoleic acid (11)
Benzoic acid (10)
Cytosine (10)
Guanine (10)
L-Histidine (10)
L-Tryptophan (10)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
15.994915 (1)
57.021464 (1)
N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (57)
RNA-seq of coding RNA (33)
ChIP-seq (11)
Methylation profiling by high throughput sequencing (8)
Methylation profiling by array (7)
Comparative genomic hybridization by array (5)
Transcription profiling by RT-PCR (4)
Unknown experiment type (3)
Other (3)
DNA-seq (3)
RNA-seq of non coding RNA (3)
RNA-seq of coding RNA from single cells (2)
MRE-seq (1)
Human - High-throughput sequencing (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
ChIP-chip by array (1)
ATAC-seq (1)
MicroRNA profiling by array (1)

Release Date

2025 (1767)
2022 (1504)
2024 (1399)
2023 (1278)
2021 (1173)
2020 (841)
2019 (567)
2018 (535)
2017 (419)
2016 (366)
2015 (281)
2026 (252)
2014 (237)
2012 (144)
2013 (133)
2011 (79)
2010 (51)
2009 (51)
2008 (30)
2007 (18)
2005 (10)
2006 (8)
2003 (6)
2004 (5)
2002 (1)
2001 (1)

Lab affiliation

Department of Cellular & Molecular Physiology, Yale School of Medicine, New Haven, CT 06520, USA. Systems Biology Institute, Yale University, New Haven, CT 06516, USA (7)
Department of Cellular & Molecular Physiology, Yale School of Medicine, New Haven, CT 06520, USA. Systems Biology Institute, Yale University, New Haven, CT 06516, USA (3)
Michigan State University (3)
West China Second University Hospital, Sichuan University (3)
Abbvie Bioresearch Center (2)
Cancer Center and Research Institute of Intestinal Diseases, Shanghai Tenth People's Hospital, School of Medicine, Tongji University (2)
Department of Biology, University of Rochester, NY, USA (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Department of Physiology & Biophysics, University of California, Irvine, Irvine, CA 92697, USA (2)
Fudan University (2)
Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang University (2)
Jiangsu Academy of Agricultural Sciences (2)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009, China (2)
SIMM (2)
Shanghai Institute of Materia Medica (2)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
Sun yat-sen university cancer center (2)
Tongji University (2)
Washington University in Saint Louis (2)
Zhejiang University (2)
the First Affiliated Hospital of Chongqing Medical University (2)
1 National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research); NHC Key Laboratory of Parasite and Vector Biology; WHO Collaborating Center for Tropical Diseases; National Center for International Research on Tropical Diseases, Shanghai 200025, China 2 The School of Global Health, Chinese Center for Tropical Diseases Research, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China (1)
1) Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany 2) School of Biomedical and Healthcare Sciences Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom (1)
1.MRC Weatherall Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Oxford OX3 9DS, UK 2.CRUK/MRC Oxford Institute for Radiation Oncology, Department of Oncology, University of Oxford, Oxford OX3 7DQ, UK (1)
3. College of Pharmacy / International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Ministry of Education (MOE) of China, Jinan University, Guangzhou 510632, China (1)
Agriculture and Agri-Food Canada, Canada (1)
Agriculture and Agri-Food Canada, Ottawa Research and Development Centre. (1)
Amgen (1)
BGI-Shenzhen (1)

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Formula Q attenuates letrozole-induced polycystic ovary syndrome through modulating multiple pathways in rat

In this research, we investigated the molecular mechanisms and signaling pathways of Formula Q attenuating PCOS using a Tandem Mass Tag (TMT) proteomics approach, bioinformatics analyses and molecular biological technology. This study aimed to comprehensively characterize the multiple molecular mech...

ORGANISM(S): Rattus norvegicus (Rat)

2026-05-25 | PXD057910 | Pride