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UnknownSignalP 6.0 predicts all five types of signal peptides using protein language models.
Not available
S-EPMC9287161 | biostudies-literature
TranscriptomicsAnnotating the secretome of mature primary human muscle cells
The Skeletal muscle is a metabolic active tissue that secretes various proteins. These so called myokines act auto-, para- and endocrine affecting muscle physiology and exert systemic effects on other tissues and organs. Myokines are also described to play a crucial role in the pathophysiology of me...
ORGANISM(S): Homo sapiens 
2013-12-03 | E-GEOD-45473 | biostudies-arrayexpress
UnknownEvaluating eukaryotic secreted protein prediction.
Not available
S-EPMC1276785 | biostudies-literature
ProteomicsLabel-free quantitative proteomic analysis for identification of in-planta Magnaporthe oryzae proteins induced cell death
The rice blast disease caused by Magnaporthe oryzae (M.oryzae) is one of the most important disease in cultivated rice (Oryza sativa L.) results in extensive loss of productivity worldwide. Therefore, here we utilized the label-free quantitative proteomic approach to identify the novel M. oryzae eff...
ORGANISM(S): Oryza sativa subsp. japonica (Rice) 
2022-04-04 | PXD026316 | Pride
Oryza sativa Perseus Label-free Magnaporthe oryzae Maxquant Nicotiana benthamiana Signalp 
UnknownEvaluation of Secretion Prediction Highlights Differing Approaches Needed for Oomycete and Fungal Effectors.
Not available
S-EPMC4688413 | biostudies-literature
UnknownComparison of Current Methods for Signal Peptide Prediction in Phytoplasmas.
Not available
S-EPMC8026896 | biostudies-literature
ProteomicsComprehensive Analysis of leaf cuticle proteome from B. juncea, B. nigra, B. rapa, and R. sativus leaf shed lights on diverse functions of differentially abundant classical and non-classical secretory targets Comprehensive Analysis of leaf cuticle proteome from B. juncea, B. nigra, B. rapa, and R. sativus leaf shed lights on diverse functions of differentially abundant classical and non-classical secretory targets
The primary sensor for environmental cues, the cuticle is an essential plant agronomical trait in crop plants. The extracellular cuticle proteome in crop plants is little understood. We performed a quantitative shotgun proteomics analysis on four economically relevant Brassicaceae members: B. juncea...
ORGANISM(S): Brassica nigra Brassica juncea Raphanus sativus Brassica rapa 
2025-07-30 | PXD056855 | Pride
Brassica agrowaste  cutinsome  differential abundant proteins: in vitro activity  n lc msms Secretory protein  signalp software 
UnknownImproving Signal and Transit Peptide Predictions Using AlphaFold2-predicted Protein Structures.
Not available
S-EPMC10843742 | biostudies-literature
GenomicsMetisa plana effectors genes
In silico prediction of effector genes in oil palm pest, Metisa plana
PRJEB66354 | ENA
TranscriptomicsAnnotating the secretome of mature primary human muscle cells
The Skeletal muscle is a metabolic active tissue that secretes various proteins. These so called myokines act auto-, para- and endocrine affecting muscle physiology and exert systemic effects on other tissues and organs. Myokines are also described to play a crucial role in the pathophysiology of me...
ORGANISM(S): Homo sapiens 
2013-12-03 | GSE45473 | GEO
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